RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 HIST1H2BAQ96A08 127 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 GNPNAT1Q96EK6 184 aaPredicted RBP7.73□□□□□ -1.17
C11orf54-201ENST00000331239 S1PR3Q99500 378 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 CR1P17927 2039 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 PDZD2O15018 2839 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 IGHV2-26A0A0B4J1V2 119 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 BTBD17A6NE02 478 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 ZNF98A6NK75 572 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 NXPH3O95157 252 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 SERPINE2P07093 398 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 RHEBQ15382 184 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 ZFP82Q8N141 532 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 TMEM217Q8N7C4 229 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 OR51H1Q8NH63 302 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 RFESDQ8TAC1 157 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 SMDT1Q9H4I9 107 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 OR1A1Q9P1Q5 309 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 PSG11Q9UQ72 335 aa7.73□□□□□ -1.17
C11orf54-201ENST00000331239 TRAV39A0A0B4J263 110 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 RBFOX2O43251 390 aaKnown RBP eCLIP7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CHST1O43916 411 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 MT-ND4LP03901 98 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 IFNA4P05014 189 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 EPHA1P21709 976 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ARF6P62330 175 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ZNF816Q0VGE8 651 aaPredicted RBP7.72□□□□□ -1.17
C11orf54-201ENST00000331239 HABP2Q14520 560 aaPredicted RBP7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CT45A1Q5HYN5 189 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ZNF833PQ6ZTB9 187 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ODF3L1Q8IXM7 274 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CT45A3Q8NHU0 189 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 RNASE11Q8TAA1 199 aaKnown RBP7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ATP5SQ99766 215 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 C20orf24Q9BUV8 137 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 A0A0G2JRQ6 117 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 A0A1B0GU03 582 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 C1orf196B1AJZ1 125 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CD5LO43866 347 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 SLC25A6P12236 298 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CATR1Q13166 79 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 HLA-DRB5Q30154 266 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 VMO1Q7Z5L0 202 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 PRR18Q8N4B5 295 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 WFDC11Q8NEX6 87 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 ZDHHC16Q969W1 377 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 MALSU1Q96EH3 234 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 TBX15Q96SF7 602 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 IFI27L2Q9H2X8 130 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 HIF1ANQ9NWT6 349 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 KIAA1456Q9P272 454 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 CHTOPQ9Y3Y2 248 aaKnown RBP7.72□□□□□ -1.17
C11orf54-201ENST00000331239 RFNGQ9Y644 331 aa7.72□□□□□ -1.17
C11orf54-201ENST00000331239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.71□□□□□ -1.172e-7■■■■□ 23.3
C11orf54-201ENST00000331239 OR13C7P0DN81 318 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 GPR12P47775 334 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 THBS3P49746 956 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 PAX9P55771 341 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RUNX1Q01196 453 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 EIF4EBP1Q13541 118 aaPredicted RBP7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RNF212Q495C1 297 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 SOHLH1Q5JUK2 328 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 AKR1C8PQ5T2L2 129 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 SPSB3Q6PJ21 355 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 C9orf139Q6ZV77 190 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 SFT2D1Q8WV19 159 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 ST6GALNAC6Q969X2 333 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 GPR146Q96CH1 333 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RNF5Q99942 180 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 DPM3Q9P2X0 92 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RBM7Q9Y580 266 aaKnown RBP7.71□□□□□ -1.18
C11orf54-201ENST00000331239 H3BP45 60 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 LY6LH3BQJ8 138 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 MMP23AO75900 390 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 DFFBO76075 338 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
C11orf54-201ENST00000331239 HTR1DP28221 377 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 MC5RP33032 325 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 SULT1A1P50225 295 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RPL23AP62750 156 aaKnown RBP7.71□□□□□ -1.18
C11orf54-201ENST00000331239 HCP5Q6MZN7 132 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 OR10X1Q8NGY0 326 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RAB40CQ96S21 281 aa7.71□□□□□ -1.18
C11orf54-201ENST00000331239 RBFOX3A6NFN3 312 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 BUB1B-PAK6H3BSN5 160 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 TGFAP01135 160 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 ZNF134P52741 427 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 CCL20P78556 96 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 LSM10Q969L4 123 aaKnown RBP7.7□□□□□ -1.18
C11orf54-201ENST00000331239 C12orf57Q99622 126 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 RARRES2Q99969 163 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 C7orf69Q9H7B7 122 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 LIN7CQ9NUP9 197 aaKnown RBP7.7□□□□□ -1.18
C11orf54-201ENST00000331239 COA4Q9NYJ1 87 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 CACNG5Q9UF02 275 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 KCNS2Q9ULS6 477 aa7.7□□□□□ -1.18
C11orf54-201ENST00000331239 POLQO75417 2590 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms