RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 FAM57BQ71RH2 274 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 ANKRD37Q7Z713 158 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 MARCH3Q86UD3 253 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PLXDC1Q8IUK5 500 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 RPP25LQ8N5L8 163 aaKnown RBP5.56□□□□□ -1.52
ZNF540-201ENST00000316433 LMX1AQ8TE12 382 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PTH2Q96A98 100 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PMCHL2Q9BQD1 86 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 GGTLC1Q9BX51 225 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PRDM14Q9GZV8 571 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 PPDPFQ9H3Y8 114 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 C1RLQ9NZP8 487 aa5.56□□□□□ -1.52
ZNF540-201ENST00000316433 A0A087WX48 190 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 C19orf67A6NJJ6 358 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 H0Y980 276 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 HMGB3O15347 200 aaKnown RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 CHST1O43916 411 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 TGFAP01135 160 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 GNB1P62873 340 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 ID3Q02535 119 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 PDCD1Q15116 288 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 NMSQ5H8A3 153 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 HLA-DQA1Q5Y7H0 255 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 PARM1Q6UWI2 310 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 DHRS13Q6UX07 377 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 APOBEC3DQ96AK3 386 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 RAB37Q96AX2 223 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 DAZAP1Q96EP5 407 aaKnown RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 LYZL4Q96KX0 146 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 MS4A6AQ9H2W1 248 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 IGFLR1Q9H665 355 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 CTXND1A0A1B0GTU2 59 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 ZNF850A8MQ14 1090 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 F8W1H4 67 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 BMPR1BO00238 502 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 NAPSAO96009 420 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 EGR1P18146 543 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 KISS1Q15726 138 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 TNXAQ16473 311 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 RPEL1Q2QD12 228 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 PDLIM3Q53GG5 364 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM136Q6ZRR5 245 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 MOB1BQ7L9L4 216 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM251Q8N6I4 163 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 OR51E1Q8TCB6 317 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 DDB2Q92466 427 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 MMABQ96EY8 250 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM222Q9H0R3 208 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 LIME1Q9H400 295 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 SLC25A22Q9H936 323 aa5.55□□□□□ -1.52
ZNF540-201ENST00000316433 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 ERRFI1Q9UJM3 462 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-201ENST00000316433 A0A1W2PP11 408 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 NPIPB5A8MRT5 1133 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CRXO43186 299 aaPredicted RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 SYNGR1O43759 233 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV1D-33P01593 117 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV1-33P01594 117 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 VEGFBP49765 207 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 PAX9P55771 341 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 MYBPHQ13203 477 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CARD17Q5XLA6 110 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM92Q6UXU6 159 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 STPG3Q8N7X2 389 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 ZBTB34Q8NCN2 500 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CLDN23Q96B33 292 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CSDC2Q9Y534 153 aaKnown RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 LINC00312Q9Y6C7 94 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CACNA1CQ13936 2221 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV3D-15A0A087WSY6 115 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGHV1OR21-1A0A087WYE8 117 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGKV1D-43A0A0B4J1Z2 117 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 hADV38S2A0JD32 116 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 DHHO43323 396 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 SYNGR3O43761 229 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 NDUFB4O95168 129 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 COX8AP10176 69 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 FXYD4P59646 89 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 WFDC2Q14508 124 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 RSPO1Q2MKA7 263 aaPredicted RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 SAMD5Q5TGI4 173 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 RPS19BP1Q86WX3 136 aaKnown RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 GCSAMQ8N6F7 178 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 VGLL1Q99990 258 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 SRSF8Q9BRL6 282 aaKnown RBP5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TPPP3Q9BW30 176 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TM2D2Q9BX73 214 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 TMEM191AQ9H0A3 160 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 IGHV5-51A0A0C4DH38 117 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 FAM90A9PA6NNJ1 464 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CD300LBA8K4G0 201 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 H3BP45 60 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 NEURL1O76050 574 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 NXPH3O95157 252 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 OR1D4P47884 311 aa5.54□□□□□ -1.52
ZNF540-201ENST00000316433 CATR1Q13166 79 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms