RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 OR2T10Q8NGZ9 312 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 HINT2Q9BX68 163 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 COMMD5Q9GZQ3 224 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 HIPK2Q9H2X6 1198 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 U3KQ87 197 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 CST7O76096 145 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 SNRNP70P08621 437 aaKnown RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 MYOD1P15172 320 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 BRS3P32247 399 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 UBA52P62987 128 aaKnown RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 WFDC11Q8NEX6 87 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 OR5B3Q8NH48 314 aa18.09■□□□□ 0.49
IRF3-201ENST00000309877 BSCL2Q96G97 398 aaPredicted RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 HEYLQ9NQ87 328 aaPredicted RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 METTL1Q9UBP6 276 aaKnown RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 PAIP2BQ9ULR5 123 aaKnown RBP18.09■□□□□ 0.49
IRF3-201ENST00000309877 TEX50A0A1B0GTY4 177 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 RGS13O14921 159 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 SPDEFO95238 335 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 OPN1MWP04001 364 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 OPN1MW2P0DN77 364 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 OPN1MW3P0DN78 364 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 IGHV4-38-2P0DP08 117 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 TMEM267Q0VDI3 215 aaPredicted RBP18.08■□□□□ 0.48
IRF3-201ENST00000309877 EAF1Q96JC9 268 aaPredicted RBP18.08■□□□□ 0.48
IRF3-201ENST00000309877 FOXC2Q99958 501 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 ZNF430Q9H8G1 570 aaPredicted RBP18.08■□□□□ 0.48
IRF3-201ENST00000309877 CYTL1Q9NRR1 136 aa18.08■□□□□ 0.48
IRF3-201ENST00000309877 STRAPQ9Y3F4 350 aaKnown RBP18.08■□□□□ 0.48
IRF3-201ENST00000309877 VPS13CQ709C8 3753 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 SULT1A1P50225 295 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 PLGLAQ15195 96 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 MMDQ15546 238 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 BRD3OSQ6XYD6 125 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 TMEM217Q8N7C4 229 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 TPSG1Q9NRR2 321 aa18.07■□□□□ 0.48
IRF3-201ENST00000309877 IFNA7P01567 189 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 CRYGBP07316 175 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 METTL15P1P0C7V9 234 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 RPP30P78346 268 aaKnown RBP18.06■□□□□ 0.48
IRF3-201ENST00000309877 MMD2Q8IY49 270 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 ZNF680Q8NEM1 530 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 OR1L8Q8NGR8 309 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 ST8SIA2Q92186 375 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 PLEKHA3Q9HB20 300 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 KIAA1456Q9P272 454 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 SIGLEC9Q9Y336 463 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 CFDP00746 253 aaPredicted RBP18.06■□□□□ 0.48
IRF3-201ENST00000309877 AVPP01185 164 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 FAM106CPP0CH98 169 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 VDAC2P45880 294 aaPredicted RBP18.06■□□□□ 0.48
IRF3-201ENST00000309877 PRCDQ00LT1 54 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 PRSS8Q16651 343 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 CYB5R2Q6BCY4 276 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 ZNF767PQ75MW2 155 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 OR4C12Q96R67 309 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 FBXL15Q9H469 300 aa18.06■□□□□ 0.48
IRF3-201ENST00000309877 RRHO14718 337 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 NBR2O15453 112 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 ACTL6BO94805 426 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 DYNLT3P51808 116 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 F2RL1P55085 397 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 EIF5AP63241 154 aaKnown RBP18.05■□□□□ 0.48
IRF3-201ENST00000309877 RPL7L1Q6DKI1 246 aaKnown RBP18.05■□□□□ 0.48
IRF3-201ENST00000309877 TMEM14EPQ6UXP3 125 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 OR1S2Q8NGQ3 325 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 OR5C1Q8NGR4 320 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 ITGB1BP2Q9UKP3 347 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 FAM96BQ9Y3D0 163 aa18.05■□□□□ 0.48
IRF3-201ENST00000309877 IFNA10P01566 189 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 TPT1P13693 172 aaKnown RBP18.04■□□□□ 0.48
IRF3-201ENST00000309877 TMEM11P17152 192 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 PJVKQ0ZLH3 352 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 EXOSC2Q13868 293 aaKnown RBP18.04■□□□□ 0.48
IRF3-201ENST00000309877 EBI3Q14213 229 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 CLINT1Q14677 625 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 PPP1R27Q86WC6 154 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 NPBQ8NG41 125 aa18.04■□□□□ 0.48
IRF3-201ENST00000309877 NBPF19A0A087WUL8 3843 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 BORCS7-ASMTA0A0B4J1R7 106 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 JTBO76095 146 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 MAS1LP35410 378 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 HBG1P69891 147 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 HBG2P69892 147 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 KLF17Q5JT82 389 aaPredicted RBP18.03■□□□□ 0.48
IRF3-201ENST00000309877 THNSL2Q86YJ6 484 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 STOML3Q8TAV4 291 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 WFDC1Q9HC57 220 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 NDUFA4L2Q9NRX3 87 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 A0A0U1RQK1 487 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 TNXAQ16473 311 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 MRGPRG-AS1Q2M3A8 158 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 FAM120AOSQ5T036 256 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 OR8G2PQ6IF36 304 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 BAP18Q8IXM2 172 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 UBQLN2Q9UHD9 624 aa18.03■□□□□ 0.48
IRF3-201ENST00000309877 NDUFA3O95167 84 aa18.02■□□□□ 0.47
IRF3-201ENST00000309877 A0A1W2PN81 502 aa18.01■□□□□ 0.47
IRF3-201ENST00000309877 NCBP2LA6PVI3 153 aaKnown RBP18.01■□□□□ 0.47
IRF3-201ENST00000309877 CHRNA7P36544 502 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms