RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PHB2Q99623 299 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 NUDT15Q9NV35 164 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 SHPKQ9UHJ6 478 aa14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 FOXA2Q9Y261 457 aaPredicted RBP14.09□□□□□ -0.15
SSSCA1-201ENST00000309328 H3BUA1 57 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 IGHG4P01861 327 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 HLA-AP01891 365 aaKnown RBP14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 OPN1MWP04001 364 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 MECP2P51608 486 aaKnown RBP14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 IFITM3Q01628 133 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 CFHR3Q02985 330 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 FOXE3Q13461 319 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 PPP1R1AQ13522 171 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 MRGPRG-AS1Q2M3A8 158 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 C4orf46Q504U0 113 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 TMEM268Q5VZI3 342 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 ZNF429Q86V71 674 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 MINDY2Q8NBR6 621 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 OR1L8Q8NGR8 309 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 COQ8AQ8NI60 647 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 NOL4LQ96MY1 436 aaPredicted RBP14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 CITED1Q99966 193 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 ZNF257Q9Y2Q1 563 aa14.08□□□□□ -0.16
SSSCA1-201ENST00000309328 LINC01548A6NM66 108 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 C15orf61A6NNL5 157 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 BRI3O95415 125 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 OR4E1P0C645 316 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 SSBP2P81877 361 aaPredicted RBP14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 ECSCRQ19T08 205 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 PLET1Q6UQ28 207 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 UNQ5815/PRO19632Q6UWF5 114 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 LYG2Q86SG7 212 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 SELENOHQ8IZQ5 122 aaKnown RBP14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 QTRT1Q9BXR0 403 aaKnown RBP14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 TMEM14BQ9NUH8 114 aa14.07□□□□□ -0.16
SSSCA1-201ENST00000309328 DUS4LO95620 317 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 PTTG1O95997 202 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 DHFRP00374 187 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 H2AFB2P0C5Z0 115 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 P0C879 139 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 EGR2P11161 476 aaPredicted RBP14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 PPIFP30405 207 aaKnown RBP14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 DHRS2Q13268 280 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 C19orf54Q5BKX5 351 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 CXorf66Q5JRM2 361 aaPredicted RBP14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 LFNGQ8NES3 379 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 PDCD10Q9BUL8 212 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 SLA2Q9H6Q3 261 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 ZFP57Q9NU63 452 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 COA4Q9NYJ1 87 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 FLVCR2Q9UPI3 526 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 TMED3Q9Y3Q3 217 aa14.06□□□□□ -0.16
SSSCA1-201ENST00000309328 C9orf170A2RU37 121 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 MSGN1A6NI15 193 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 IGLV1-40P01703 118 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 TRAPPC2P0DI81 140 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 TRAPPC2BP0DI82 140 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 ANXA7P20073 488 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 OR2B8PP59922 312 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 DCTN2Q13561 401 aaKnown RBP14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 TMEM65Q6PI78 240 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 ZNF329Q86UD4 541 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 SLC35G3Q8N808 338 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 LINC00527Q9UJ94 153 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 OR51B2Q9Y5P1 312 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
SSSCA1-201ENST00000309328 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 TRAV6A0A075B6T7 132 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 A0A1W2PN81 502 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 CYB5BO43169 146 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 PRAF2O60831 178 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 SLC25A6P12236 298 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 CHRNA7P36544 502 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 AARDQ4LEZ3 155 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 NRARPQ7Z6K4 114 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 LHFPL5Q8TAF8 219 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 FAM110DQ8TAY7 271 aaPredicted RBP14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 FAM103A1Q9BTL3 118 aaKnown RBP14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 FBXO7Q9Y3I1 522 aa14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 TSSC4Q9Y5U2 329 aaPredicted RBP14.04□□□□□ -0.16
SSSCA1-201ENST00000309328 ANK2Q01484 3957 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 TRAV3A0A0B4J244 114 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 NPIPB5A8MRT5 1133 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 G3V318 75 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 IL5P05113 134 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 SULT1A3P0DMM9 295 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 SULT1A4P0DMN0 295 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 PSMB8P28062 276 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 HSPE1P61604 102 aaKnown RBP14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 CD83Q01151 205 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 TTC9CQ8N5M4 171 aa14.03□□□□□ -0.16
SSSCA1-201ENST00000309328 OR52E5Q8NH55 327 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms