RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SRSF7Q16629 238 aaKnown RBP eCLIP4.03□□□□□ -1.76
CAST-201ENST00000309190 MLANAQ16655 118 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 Q8N7P7 452 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 NEIL1Q96FI4 390 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 GAFA1Q96PS6 74 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 NEU1Q99519 415 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 IGHV3-66A0A0C4DH42 116 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 H3BTX0 84 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 PITX3O75364 302 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 FABP1P07148 127 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 SEC11BP0C7V7 166 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 USF1P22415 310 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 RPL30P62888 115 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 AKR1C1Q04828 323 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 HAGHQ16775 308 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 CR1LQ2VPA4 569 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 RPL7L1Q6DKI1 246 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 TBC1D26Q86UD7 250 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 SGPP2Q8IWX5 399 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 DRAM1Q8N682 238 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 RNASEH2CQ8TDP1 164 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 C14orf144Q96I85 54 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 NOL4LQ96MY1 436 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 SAV1Q9H4B6 383 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 TAAR5O14804 337 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 MGST3O14880 152 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 SSSCA1O60232 199 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 YPEL1O60688 119 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 IGKV1D-33P01593 117 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 IGKV1-33P01594 117 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 MT-ND4LP03901 98 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TPT1P13693 172 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 KITLGP21583 273 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 SNRPEP62304 92 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 IL24Q13007 206 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 EIF4EBP1Q13541 118 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 RAB32Q13637 225 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TNXAQ16473 311 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 CXorf66Q5JRM2 361 aaPredicted RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 FAM120AOSQ5T036 256 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 VMO1Q7Z5L0 202 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TGIF2LXQ8IUE1 241 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 MRPL30Q8TCC3 161 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 PSMG3-AS1Q96PY0 264 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 YPEL2Q96QA6 119 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 PHB2Q99623 299 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 GGACTQ9BVM4 153 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 MRPL20Q9BYC9 149 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 GNB4Q9HAV0 340 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 SLC2A9Q9NRM0 540 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TPSG1Q9NRR2 321 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 GHRLQ9UBU3 117 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 RPUSD1Q9UJJ7 312 aaKnown RBP4.03□□□□□ -1.76
CAST-201ENST00000309190 KCNIP3Q9Y2W7 256 aa4.03□□□□□ -1.76
CAST-201ENST00000309190 TRAV1-1A0A0B4J248 108 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 IFNA10P01566 189 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 CXCL1P09341 107 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 PAX9P55771 341 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 RPL11P62913 178 aaKnown RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 HSD17B11Q8NBQ5 300 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 OR10W1Q8NGF6 305 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TMED6Q8WW62 240 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 SPSB4Q96A44 273 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TP53RKQ96S44 253 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 CTDSP1Q9GZU7 261 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 SMDT1Q9H4I9 107 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 UNKLQ9H9P5 680 aaKnown RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 TMEM242Q9NWH2 141 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 JKAMPQ9P055 326 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 DOK5Q9P104 306 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 H3BUX3 64 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TIMM23O14925 209 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 FCN3O75636 299 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 S1PR2O95136 353 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TMEM50AO95807 157 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 RAB5AP20339 215 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 SAA4P35542 130 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 CT45A1Q5HYN5 189 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 DPPA2Q7Z7J5 298 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 COMMD1Q8N668 190 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 CT45A3Q8NHU0 189 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 C2orf50Q96LR7 162 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 PBDC1Q9BVG4 233 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 RIMS4Q9H426 269 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 IL36GQ9NZH8 169 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 CACNG5Q9UF02 275 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 LINC00473A8K010 186 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TRDCB7Z8K6 153 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 MBPP02686 304 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 LOXP28300 417 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 TMEM33P57088 247 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 BLCAPP62952 87 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 TMEM267Q0VDI3 215 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 RHEBQ15382 184 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 DEFB113Q30KQ7 82 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 Q6P435 159 aa4.02□□□□□ -1.77
CAST-201ENST00000309190 C1orf229Q6ZS94 237 aaPredicted RBP4.02□□□□□ -1.77
CAST-201ENST00000309190 NHLRC2Q8NBF2 726 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms