RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 M0R1W7 72 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 PCSK4Q6UW60 755 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 TEX48A0A1B0GUV7 120 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 M0R1B8 84 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 CCL3L1P16619 93 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 EMC6Q9BV81 110 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 DIRC3C9JPN6 131 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 HCRTO43612 131 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 ZNF501Q96CX3 271 aaPredicted RBP3.43□□□□□ -1.86
USH2A-201ENST00000307340 CLEC7AQ9BXN2 247 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 GAPTQ8N292 157 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 TEX45Q8NA69 505 aa3.43□□□□□ -1.86
USH2A-201ENST00000307340 CPAMD8Q8IZJ3 1885 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ACYP1P07311 99 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 FOXS1O43638 330 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 PGLYRP1O75594 196 aaPredicted RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 DUSP14O95147 198 aaKnown RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 EFEMP2O95967 443 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF708P17019 499 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SLAQ13239 276 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MOGAT3Q86VF5 341 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MED13Q9UHV7 2174 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 IGLV1-36A0A0B4J1U3 117 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 F8W1H4 67 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR2H2O95918 312 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TUSC1Q2TAM9 212 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF488Q96MN9 340 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TIMP4Q99727 224 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 LPAR5Q9H1C0 372 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MESP2Q0VG99 397 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 C5orf30Q96GV9 206 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 WDYHV1Q96HA8 205 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 C16orf92Q96LL3 132 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 CST7O76096 145 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 LINC01590Q5TEZ4 76 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 RPH3ALQ9UNE2 315 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TRAV8-7A0A075B6U6 113 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 C1QCP02747 245 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SLC25A16P16260 332 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 C1orf122Q6ZSJ8 110 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TRAV39A0A0B4J263 110 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR11H12B2RN74 326 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SCGB1A1P11684 91 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 METTL27Q8N6F8 245 aaPredicted RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR11H1Q8NG94 326 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR11H2Q8NH07 326 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR4X1Q8NH49 305 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 IL36BQ9NZH7 164 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MED12Q93074 2177 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ADRA2AP08913 450 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 APCDD1LQ8NCL9 501 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 OR1K1Q8NGR3 316 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TNFRSF12AQ9NP84 129 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 PILRBQ9UKJ0 227 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MRPS18BQ9Y676 258 aaKnown RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 SOX8P57073 446 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MUC7Q8TAX7 377 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ADAMTS20P59510 1910 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 IFI27P40305 119 aaPredicted RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 LINC00477Q96M19 166 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 NDUFAF3Q9BU61 184 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF835Q9Y2P0 537 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 RAXQ9Y2V3 346 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 LHFPL6Q9Y693 200 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ABCA4P78363 2273 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 CENPVL1A0A0U1RR11 272 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 H3BUA1 57 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 CCL11P51671 97 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 FAM159AQ6UWV7 190 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SPRED2Q7Z698 418 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 LINC00518Q8N0U6 118 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TMEM170AQ8WVE7 144 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 GLMPQ8WWB7 406 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 IZUMO1RA6ND01 250 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF497Q6ZNH5 498 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 C20orf204Q6ZNR8 217 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZDHHC16Q969W1 377 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 SCGB3A1Q96QR1 104 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ASCL3Q9NQ33 180 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MRGPRFQ96AM1 343 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 ZNF775Q96BV0 537 aaPredicted RBP3.42□□□□□ -1.86
USH2A-201ENST00000307340 TRGV9Q99603 122 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 A0A1W2PQF6 199 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 CXCL3P19876 107 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 Q1RN00 199 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 TMEM86BQ8N661 226 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 RNF182Q8N6D2 247 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 MEGF9Q9H1U4 602 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
USH2A-201ENST00000307340 EP400Q96L91 3159 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 TRBV7-9A0A0J9YWB2 115 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 FCGR3BO75015 233 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 SRD5A1P18405 259 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 ASCL4Q6XD76 172 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 Q6ZS52 159 aa3.41□□□□□ -1.86
USH2A-201ENST00000307340 NPCDR1Q9BY65 106 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms