RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LY6HO94772 140 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 FOXG1P55316 489 aaPredicted RBP8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 OR4A47Q6IF82 309 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 FAM131CQ96AQ9 280 aa8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 NXF2Q9GZY0 626 aaKnown RBP8.99□□□□□ -0.97
SYNPO2-201ENST00000307142 LY6G6EA0A0G2JKS1 128 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 HKR1P10072 659 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 MAS1LP35410 378 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM37Q8WXS4 190 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 U3KQA8 63 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 HMSDA8MTL9 139 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 CD81P60033 236 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 LDLRAD2Q5SZI1 272 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 OSR1Q8TAX0 266 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 NEUROG1Q92886 237 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 ZNF841Q6ZN19 808 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 DUX3Q96PT4 197 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 BPESC1Q9GZL8 116 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 AKAP6Q13023 2319 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 IGKV3OR2-268A0A0C4DH90 116 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 MPDU1O75352 247 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 TGOLN2O43493 480 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 FAM159AQ6UWV7 190 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 DMRTA2Q96SC8 542 aa8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 AURKAIP1Q9NWT8 199 aaPredicted RBP8.98□□□□□ -0.97
SYNPO2-201ENST00000307142 C19orf54Q5BKX5 351 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 WDR73Q6P4I2 378 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 UQCC3Q6UW78 93 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 HSPB7Q9UBY9 170 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 PIN1P1O15428 100 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 MMP9P14780 707 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 CXCL3P19876 107 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 OR51G1Q8NGK1 321 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 GTF3AQ92664 365 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 MRPL13Q9BYD1 178 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SNURFLB1AK76 121 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 NCMAPQ5T1S8 102 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SAP30O75446 220 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 HLA-DQB1P01920 261 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 ATP6V0CP27449 155 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 WNT10AQ9GZT5 417 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 C21orf62Q9NYP8 219 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SCGB1C2P0DMR2 95 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 LINC00527Q9UJ94 153 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SAA2-SAA4A0A096LPE2 208 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SAA2P0DJI9 122 aaPredicted RBP8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 MRPL54Q6P161 138 aaKnown RBP8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 LINC00305Q7Z4B0 112 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM18Q96B42 140 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 ANAPC16Q96DE5 110 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 LINC01587Q99440 93 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 SEC11CQ9BY50 192 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 OR51M1Q9H341 326 aa8.97□□□□□ -0.97
SYNPO2-201ENST00000307142 MELTFP08582 738 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 IGHG3P01860 377 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 TMEM14DPA8MWL7 114 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 NPIPB6E9PJ23 425 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 CA2P00918 260 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 RUNX1Q01196 453 aa8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 PAQR4Q8N4S7 273 aaPredicted RBP8.96□□□□□ -0.97
SYNPO2-201ENST00000307142 FOXI3A8MTJ6 420 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 ZNF56Q15929 161 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 HLA-DRB5Q30154 266 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 ZNF474Q6S9Z5 364 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 MRPL30Q8TCC3 161 aaKnown RBP8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 LYZL4Q96KX0 146 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 CLPSP04118 112 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 MYOD1P15172 320 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 LHFPL5Q8TAF8 219 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 PACRGQ96M98 296 aaPredicted RBP8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 OPN4Q9UHM6 478 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 TIMM23O14925 209 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 PHYHIPLQ96FC7 376 aa8.96□□□□□ -0.98
SYNPO2-201ENST00000307142 TEX50A0A1B0GTY4 177 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ANOS1P23352 680 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 MFAP2P55001 183 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 BSXQ3C1V8 233 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 OR11H7Q8NGC8 314 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ZMAT5Q9UDW3 170 aaKnown RBP8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 COL8A2P25067 703 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 AANATQ16613 207 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 GPR132Q9UNW8 380 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 FAM90A26D6RGX4 464 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 E7EQL1 145 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ISLRO14498 428 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 EFNA2O43921 213 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 DPPA3Q6W0C5 159 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 SPTBN1Q01082 2364 aaKnown RBP8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ZP1P60852 638 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 HERVK_113P61574 105 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ZNF385CQ66K41 422 aaPredicted RBP8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 TMEM200BQ69YZ2 307 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 C9JCJ5 164 aa8.95□□□□□ -0.98
SYNPO2-201ENST00000307142 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms