RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A15PP0C7V4 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A13PP0C7W8 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A14PP0C7W9 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A24PP0C7X0 464 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 CEACAM21Q3KPI0 293 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 NEUROG1Q92886 237 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 CD7P09564 240 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 TPRX1Q8N7U7 411 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 H3BMM0 161 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 SRSF7Q16629 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
PCF11-201ENST00000298281 LYZL2Q7Z4W2 148 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
PCF11-201ENST00000298281 C1QL3Q5VWW1 255 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 OPN3Q9H1Y3 402 aaPredicted RBP10.36□□□□□ -0.75
PCF11-201ENST00000298281 UQCR10Q9UDW1 63 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 H0Y980 276 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 GFRA3O60609 400 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 FAM168AQ92567 244 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 HBDP02042 147 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
PCF11-201ENST00000298281 FGF12P61328 243 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 HAPLN4Q86UW8 402 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 RNF115Q9Y4L5 304 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 PRR33A8MZF0 331 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 MRPS18AQ9NVS2 196 aaKnown RBP10.36□□□□□ -0.75
PCF11-201ENST00000298281 CALYQ9NYX4 217 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 FAM214BQ7L5A3 538 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 OR10S1Q8NGN2 331 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 TRAV2A0A0B4J234 112 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 A0A0G2JLM5 398 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 TMEM155Q4W5P6 130 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 C8orf46Q8TAG6 207 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 ANAPC13Q9BS18 74 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 TLNRD1Q9H1K6 362 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 DNAJC4Q9NNZ3 241 aa10.36□□□□□ -0.75
PCF11-201ENST00000298281 TCF20Q9UGU0 1960 aaKnown RBP10.36□□□□□ -0.75
PCF11-201ENST00000298281 ARL14EPLP0DKL9 152 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 ZNF645Q8N7E2 425 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 UCN2Q96RP3 112 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 RARRES2Q99969 163 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 NHSL1Q5SYE7 1610 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 MDKP21741 143 aaPredicted RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 TMEM126AQ9H061 195 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 DOCK4Q8N1I0 1966 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 LEMD1Q68G75 181 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 SFXN3Q9BWM7 321 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 TRPM3Q9HCF6 1732 aaPredicted RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 MUC21A0A0G2JKD1 596 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 MUC21A0A140T8X8 626 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 BCL2P10415 239 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 UBE2V2Q15819 145 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 MUC21Q5SSG8 566 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 DNM1P46Q6ZS02 220 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 SMRP1Q8NCR6 262 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 TTTY12Q9BZ98 90 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 MARF1Q9Y4F3 1742 aaKnown RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 LOC102723996A0A087X1L8 192 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 S4R3C0 116 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 ABCA3Q99758 1704 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 FAM90A26D6RGX4 464 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 IL9P15248 144 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 FSTP19883 344 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 UCP2P55851 309 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 ABHD12Q8N2K0 398 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 ADAD2Q8NCV1 583 aaKnown RBP10.35□□□□□ -0.75
PCF11-201ENST00000298281 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
PCF11-201ENST00000298281 NTN1O95631 604 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 LIPFP07098 398 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 MPV17P39210 176 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
PCF11-201ENST00000298281 TMEM167AQ8TBQ9 72 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 ST6GAL2Q96JF0 529 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 TRGC2P03986 189 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 IFI6P09912 130 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 C19orf24Q9BVV8 132 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 ZNF430Q9H8G1 570 aaPredicted RBP10.34□□□□□ -0.75
PCF11-201ENST00000298281 PRR19A6NJB7 356 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 PAX4O43316 350 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 SPSB2Q99619 263 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 OR51M1Q9H341 326 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 V9GYH0 126 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 DSPPQ9NZW4 1301 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 CD5LO43866 347 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 IFI27P40305 119 aaPredicted RBP10.34□□□□□ -0.75
PCF11-201ENST00000298281 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 C9orf40Q8IXQ3 194 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 DDA1Q9BW61 102 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 TGIF2-C20orf24A0A0A6YYL0 155 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 SNAI2O43623 268 aa10.34□□□□□ -0.75
PCF11-201ENST00000298281 SRD5A1P18405 259 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms