RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CBY1Q9Y3M2 126 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 SMUG1Q53HV7 270 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 CLEC19AQ6UXS0 136 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 RTN4RL2Q86UN3 420 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 TXNDC17Q9BRA2 123 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 AICDAQ9GZX7 198 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 SIPA1L1O43166 1804 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 GPR183P32249 361 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 C1QTNF5Q9BXJ0 243 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 MRPL18Q9H0U6 180 aaKnown RBP14.61□□□□□ -0.07
SHANK1-201ENST00000293441 ASXL3Q9C0F0 2248 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 AQP10Q96PS8 301 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 NUTF2P61970 127 aaKnown RBP14.61□□□□□ -0.07
SHANK1-201ENST00000293441 HSPB9Q9BQS6 159 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 RRHO14718 337 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 ICAM4Q14773 271 aa14.61□□□□□ -0.07
SHANK1-201ENST00000293441 NPDC1Q9NQX5 325 aaPredicted RBP14.61□□□□□ -0.07
SHANK1-201ENST00000293441 ICE1Q9Y2F5 2266 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 IGHV3OR16-8A0A075B7F1 116 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 KBTBD11-OT1A0A1B0GTJ5 212 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 LHFPL5Q8TAF8 219 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 MRPL20Q9BYC9 149 aaKnown RBP14.6□□□□□ -0.07
SHANK1-201ENST00000293441 ZNF25P17030 456 aaPredicted RBP14.6□□□□□ -0.07
SHANK1-201ENST00000293441 COLCA1Q6ZS62 124 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 MRPS18CQ9Y3D5 142 aaKnown RBP14.6□□□□□ -0.07
SHANK1-201ENST00000293441 SCN8AQ9UQD0 1980 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 A0A0G2JLM5 398 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 TRGC1P0CF51 173 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 OR4A47Q6IF82 309 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 ZNF418Q8TF45 676 aaPredicted RBP14.6□□□□□ -0.07
SHANK1-201ENST00000293441 CBLN4Q9NTU7 201 aa14.6□□□□□ -0.07
SHANK1-201ENST00000293441 SCN5AQ14524 2016 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 IQCF6A8MYZ5 107 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 PPP1R17O96001 155 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 ZNF660Q6AZW8 331 aaPredicted RBP14.59□□□□□ -0.07
SHANK1-201ENST00000293441 CLDND2Q8NHS1 167 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 GREB1LQ9C091 1923 aaPredicted RBP14.59□□□□□ -0.07
SHANK1-201ENST00000293441 CEACAM4O75871 244 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 APC2O95996 2303 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 C19orf24Q9BVV8 132 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 SPRR3Q9UBC9 169 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 MT-ND6P03923 174 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 UQCRFS1P47985 274 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 IGHV3-11P01762 117 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 TAS2R60P59551 318 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 TRGC2P03986 189 aa14.59□□□□□ -0.07
SHANK1-201ENST00000293441 LGALS3P17931 250 aaKnown RBP14.59□□□□□ -0.07
SHANK1-201ENST00000293441 ZCCHC24Q8N2G6 241 aaKnown RBP14.59□□□□□ -0.07
SHANK1-201ENST00000293441 C17orf98A8MV24 154 aa14.58□□□□□ -0.07
SHANK1-201ENST00000293441 OSR1Q8TAX0 266 aaPredicted RBP14.58□□□□□ -0.07
SHANK1-201ENST00000293441 LCTP09848 1927 aa14.58□□□□□ -0.07
SHANK1-201ENST00000293441 IL6RP08887 468 aaPredicted RBP14.58□□□□□ -0.08
SHANK1-201ENST00000293441 GCHFRP30047 84 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 EMP1P54849 157 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 GREB1Q4ZG55 1949 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 STAG3L2P0CL84 134 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 H2BFSP57053 126 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 DNLZQ5SXM8 178 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 CSRP3P50461 194 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 DUX3Q96PT4 197 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 LYNX1G3V0Z9 82 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 LYNX1P0DP58 116 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 CD59P13987 128 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 CCL3L1P16619 93 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 ZIC4Q8N9L1 334 aa14.58□□□□□ -0.08
SHANK1-201ENST00000293441 VDAC2P45880 294 aaPredicted RBP14.57□□□□□ -0.08
SHANK1-201ENST00000293441 MEIG1Q5JSS6 88 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 HLA-DQA1P01909 254 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 HTN3P15516 51 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 LOC102724200A0A096LPH7 203 aaPredicted RBP14.57□□□□□ -0.08
SHANK1-201ENST00000293441 PSMB11A5LHX3 300 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 NPIPB9F8W1W9 429 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 GEMIN7Q9H840 131 aaKnown RBP14.57□□□□□ -0.08
SHANK1-201ENST00000293441 DEPPQ9NTK1 212 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 TGIF2-C20orf24A0A0A6YYL0 155 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 IFI27L2Q9H2X8 130 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 PINLYPA6NC86 204 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 OTX1P32242 354 aaPredicted RBP14.57□□□□□ -0.08
SHANK1-201ENST00000293441 RND3P61587 244 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 NRN1LQ496H8 165 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 TM2D1Q9BX74 207 aa14.57□□□□□ -0.08
SHANK1-201ENST00000293441 THADAQ6YHU6 1953 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 REPIN1Q9BWE0 567 aaKnown RBP14.56□□□□□ -0.08
SHANK1-201ENST00000293441 A0A0G2JK05 382 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 C21orf62Q9NYP8 219 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.56□□□□□ -0.08
SHANK1-201ENST00000293441 IGFBP2P18065 325 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 ZFP36L1Q07352 338 aaKnown RBP14.56□□□□□ -0.08
SHANK1-201ENST00000293441 KIAA1644Q3SXP7 199 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 TEX45Q8NA69 505 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.56□□□□□ -0.08
SHANK1-201ENST00000293441 LINC00312Q9Y6C7 94 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 TFF1P04155 84 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 MEF2CQ06413 473 aaPredicted RBP14.56□□□□□ -0.08
SHANK1-201ENST00000293441 LEPROTL1O95214 131 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 PRSS2P07478 247 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 KIR2DL4Q99706 377 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 AGAP20933 346 aa14.56□□□□□ -0.08
SHANK1-201ENST00000293441 TRBV20OR9-2A0A075B6H5 130 aa14.55□□□□□ -0.08
SHANK1-201ENST00000293441 IGLV3-12A0A075B6K2 115 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms