RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 CST9LP1Q5W188 147 aa15.05■□□□□ -0
SHKBP1-201ENST00000291842 GAB2Q9UQC2 676 aa15.05■□□□□ -0
SHKBP1-201ENST00000291842 PXMP4Q9Y6I8 212 aa15.05■□□□□ -0
SHKBP1-201ENST00000291842 ITGB1BP1O14713 200 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 NBL1P41271 181 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 ATP5G3P48201 142 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 C1orf159Q96HA4 380 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 TMEM204Q9BSN7 226 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 GGTLC1Q9BX51 225 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 TMEM14BQ9NUH8 114 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 AURKAIP1Q9NWT8 199 aaPredicted RBP15.04■□□□□ -0
SHKBP1-201ENST00000291842 C17orf100A8MU93 164 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 CT45A6P0DMU7 189 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 CT45A5P0DMU8 189 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 CT45A7P0DMV0 189 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 CCL3L1P16619 93 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 ARSJQ5FYB0 599 aaPredicted RBP15.04■□□□□ -0
SHKBP1-201ENST00000291842 TEX36Q5VZQ5 186 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.04■□□□□ -0
SHKBP1-201ENST00000291842 DIRC2Q96SL1 478 aa15.04■□□□□ -0
SHKBP1-201ENST00000291842 RPUSD1Q9UJJ7 312 aaKnown RBP15.04■□□□□ -0
SHKBP1-201ENST00000291842 SRRM4A7MD48 611 aaKnown RBP15.03■□□□□ -0
SHKBP1-201ENST00000291842 CA2P00918 260 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 SMIM6P0DI80 62 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 HSPE1P61604 102 aaKnown RBP15.03■□□□□ -0
SHKBP1-201ENST00000291842 SLC24A4Q8NFF2 622 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 CCL17Q92583 94 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 FRZBQ92765 325 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 FAM122AQ96E09 287 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 NEIL1Q96FI4 390 aaPredicted RBP15.03■□□□□ -0
SHKBP1-201ENST00000291842 NIT2Q9NQR4 276 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 SLC25A10Q9UBX3 287 aaPredicted RBP15.03■□□□□ -0
SHKBP1-201ENST00000291842 IFITM10A6NMD0 228 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 SEC14L6B5MCN3 397 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 SOX15O60248 233 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 FCN3O75636 299 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 HOXA5P20719 270 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 NPY1RP25929 384 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 OPRK1P41145 380 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 PDZD11Q5EBL8 140 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 ABHD5Q8WTS1 349 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 ENY2Q9NPA8 101 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 FOXA2Q9Y261 457 aaPredicted RBP15.03■□□□□ -0
SHKBP1-201ENST00000291842 OR51B2Q9Y5P1 312 aa15.03■□□□□ -0
SHKBP1-201ENST00000291842 TRGV8A0A0C4DH27 118 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 ARL14EPLP0DKL9 152 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 TNFRSF1AP19438 455 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 SLC25A48Q6ZT89 311 aaKnown RBP15.02■□□□□ -0
SHKBP1-201ENST00000291842 OR13D1Q8NGV5 346 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 DERL1Q9BUN8 251 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 ELOVL1Q9BW60 279 aa15.02■□□□□ -0
SHKBP1-201ENST00000291842 ARFGEF3Q5TH69 2177 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 hADV38S2A0JD32 116 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 MPDU1O75352 247 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 LY86O95711 162 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 TRGC1P0CF51 173 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 RPL31P62899 125 aaKnown RBP15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 FOXC1Q12948 553 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 CTDSP1Q9GZU7 261 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 SAP30LQ9HAJ7 183 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 SLC35D1Q9NTN3 355 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 ELOVL5Q9NYP7 299 aa15.02□□□□□ -0.01
SHKBP1-201ENST00000291842 HRASP01112 189 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 REG1BP48304 166 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 TMPRSS3P57727 454 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 CORO2AQ92828 525 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 GGACTQ9BVM4 153 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 NPVFQ9HCQ7 196 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 RELNP78509 3460 aa15.01□□□□□ -0.01
SHKBP1-201ENST00000291842 NKX6-3A6NJ46 265 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 J3QR06 171 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 GNB1P62873 340 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 MOB3BQ86TA1 216 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 H1FXQ92522 213 aaKnown RBP15□□□□□ -0.01
SHKBP1-201ENST00000291842 NEUROG1Q92886 237 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 ADTRPQ96IZ2 230 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 IL6RP08887 468 aaPredicted RBP15□□□□□ -0.01
SHKBP1-201ENST00000291842 B2MP61769 119 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 SPATA31B1PQ5VZV4 182 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 LYPD2Q6UXB3 125 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 ASCL5Q7RTU5 278 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 LINC00574Q9H8X3 128 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 LSM4Q9Y4Z0 139 aaKnown RBP15□□□□□ -0.01
SHKBP1-201ENST00000291842 LINC00312Q9Y6C7 94 aa15□□□□□ -0.01
SHKBP1-201ENST00000291842 PGPEP1LA6NFU8 196 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 H7BYZ3 331 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 NDUFB4O95168 129 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 SPACA3Q8IXA5 215 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 WFIKKN1Q96NZ8 548 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 TCEAL7Q9BRU2 100 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 SEPSECSQ9HD40 501 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 TRBV24-1A0A075B6N3 115 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 PFN1P07737 140 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 GALR1P47211 349 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 CDX1P47902 265 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 TMEM200BQ69YZ2 307 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 TEPPQ6URK8 271 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 STPG3Q8N7X2 389 aa14.99□□□□□ -0.01
SHKBP1-201ENST00000291842 RAB1CQ92928 201 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms