RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 IGHV1-18A0A0C4DH31 117 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 A0A0G2JK05 382 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 MOSP00540 346 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 IBA57Q5T440 356 aaKnown RBP15.62■□□□□ 0.09
PCDH1-201ENST00000287008 AMMECR1LQ6DCA0 310 aa15.62■□□□□ 0.09
PCDH1-201ENST00000287008 NUTF2P61970 127 aaKnown RBP15.61■□□□□ 0.09
PCDH1-201ENST00000287008 LYNX1G3V0Z9 82 aa15.61■□□□□ 0.09
PCDH1-201ENST00000287008 CA2P00918 260 aa15.61■□□□□ 0.09
PCDH1-201ENST00000287008 ACAA1P09110 424 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-201ENST00000287008 LYNX1P0DP58 116 aa15.61■□□□□ 0.09
PCDH1-201ENST00000287008 C21orf62Q9NYP8 219 aa15.61■□□□□ 0.09
PCDH1-201ENST00000287008 ZNF407Q9C0G0 2248 aa15.61■□□□□ 0.09
PCDH1-201ENST00000287008 PROB1E7EW31 1015 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.6■□□□□ 0.09
PCDH1-201ENST00000287008 SHISA3A0PJX4 238 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 PLSCR4Q9NRQ2 329 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 DLX6P56179 175 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 CBLN2Q8IUK8 224 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 MRPL20Q9BYC9 149 aaKnown RBP15.6■□□□□ 0.09
PCDH1-201ENST00000287008 TUBA4BQ9H853 241 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 H3BTX0 84 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 UCP1P25874 307 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 CX3CL1P78423 397 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 CHAC2Q8WUX2 184 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 ARPC1AQ92747 370 aa15.6■□□□□ 0.09
PCDH1-201ENST00000287008 AREGP15514 252 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 WDR82Q6UXN9 313 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 MRPL32Q9BYC8 188 aaKnown RBP15.59■□□□□ 0.09
PCDH1-201ENST00000287008 TRAV34A0A0B4J273 112 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 AP4M1O00189 453 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 OR4A47Q6IF82 309 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 BMPERQ8N8U9 685 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 PLSCR2Q9NRY7 297 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 AP5S1Q9NUS5 200 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 METRNQ9UJH8 293 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 PCNX2A6NKB5 2137 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 C17orf98A8MV24 154 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 ZNF362Q5T0B9 420 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-201ENST00000287008 GALNT14Q96FL9 552 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 SPG11Q96JI7 2443 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 IGHV3-49A0A0A0MS15 119 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 SIAH2O43255 324 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 MEOX2P50222 304 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 RPS20P60866 119 aaKnown RBP15.59■□□□□ 0.09
PCDH1-201ENST00000287008 HIST1H1AQ02539 215 aaPredicted RBP15.59■□□□□ 0.09
PCDH1-201ENST00000287008 ZNF841Q6ZN19 808 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 HSPB8Q9UJY1 196 aa15.59■□□□□ 0.09
PCDH1-201ENST00000287008 FER1L5A0AVI2 2057 aa15.58■□□□□ 0.09
PCDH1-201ENST00000287008 Q6ZS92 163 aa15.58■□□□□ 0.09
PCDH1-201ENST00000287008 DOCK4Q8N1I0 1966 aa15.58■□□□□ 0.09
PCDH1-201ENST00000287008 PDCD11Q14690 1871 aaKnown RBP15.58■□□□□ 0.08
PCDH1-201ENST00000287008 HSPB1P04792 205 aaKnown RBP15.58■□□□□ 0.08
PCDH1-201ENST00000287008 GNLYP22749 145 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 GGNQ86UU5 652 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 SPSB4Q96A44 273 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 IFI27L2Q9H2X8 130 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 M0QZK8 103 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 IGKV3-20P01619 116 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 ARL14EPLP0DKL9 152 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 CLDND2Q8NHS1 167 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 EFNA2O43921 213 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 ZNF250P15622 560 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 OR8A1Q8NGG7 326 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 NEUROG3Q9Y4Z2 214 aa15.58■□□□□ 0.08
PCDH1-201ENST00000287008 DICER1Q9UPY3 1922 aaKnown RBP15.57■□□□□ 0.08
PCDH1-201ENST00000287008 CRXO43186 299 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-201ENST00000287008 MT-ND6P03923 174 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 ANOS1P23352 680 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 RPL29P47914 159 aaKnown RBP15.57■□□□□ 0.08
PCDH1-201ENST00000287008 FOXG1P55316 489 aaPredicted RBP15.57■□□□□ 0.08
PCDH1-201ENST00000287008 TMEM133Q9H2Q1 129 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 GPR183P32249 361 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 CKS2P33552 79 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 TMEM177Q53S58 311 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 C19orf54Q5BKX5 351 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 FAM131CQ96AQ9 280 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 PRSS22Q9GZN4 317 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 H2BFSP57053 126 aa15.57■□□□□ 0.08
PCDH1-201ENST00000287008 RND3P61587 244 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 PLPPR1Q8TBJ4 325 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 S4R3C0 116 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 CUL9Q8IWT3 2517 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 LINC00862A6NCI5 91 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 CRYBB3P26998 211 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 CA7P43166 264 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 LYRM7Q5U5X0 104 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 ZNF660Q6AZW8 331 aaPredicted RBP15.56■□□□□ 0.08
PCDH1-201ENST00000287008 GOLT1AQ6ZVE7 132 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 MSGN1A6NI15 193 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 LYPD3O95274 346 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 DSCR9P59020 149 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 ZNF672Q499Z4 452 aaPredicted RBP15.56■□□□□ 0.08
PCDH1-201ENST00000287008 FAM159AQ6UWV7 190 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 CYP2G1PQ6ZSU1 146 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 MDS2Q8NDY4 140 aa15.56■□□□□ 0.08
PCDH1-201ENST00000287008 IGHV1-46P01743 117 aa15.55■□□□□ 0.08
PCDH1-201ENST00000287008 CD99P14209 185 aa15.55■□□□□ 0.08
PCDH1-201ENST00000287008 MST1P26927 711 aa15.55■□□□□ 0.08
PCDH1-201ENST00000287008 CD81P60033 236 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms