RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 RPL11P62913 178 aaKnown RBP13.24□□□□□ -0.29
USP43-201ENST00000285199 OR5P3Q8WZ94 311 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 A8MWP6 167 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 SMPD2O60906 423 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 NUDT3O95989 172 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 PPOXP50336 477 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 TGIF2LYQ8IUE0 185 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 CCL13Q99616 98 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 NABP2Q9BQ15 211 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 PGPA6NDG6 321 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 PLA2G5P39877 138 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 NMUP48645 174 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 TNXAQ16473 311 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 FNDC1Q4ZHG4 1894 aaPredicted RBP13.24□□□□□ -0.29
USP43-201ENST00000285199 MIEN1Q9BRT3 115 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 C10orf113Q5VZT2 155 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 SARAFQ96BY9 339 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 RBM14Q96PK6 669 aaKnown RBP13.24□□□□□ -0.29
USP43-201ENST00000285199 CHRDL1Q9BU40 450 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
USP43-201ENST00000285199 UNQ5815/PRO19632Q6UWF5 114 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 MIR17HGQ75NE6 70 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 OR13A1Q8NGR1 328 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A10PA6NDY2 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A18PA6NE21 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A16PA6NEW6 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A20PA6NIJ5 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A8PA6NJQ4 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A7PA6NKC0 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A22PA8MWA6 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A12PA8MX19 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A5PA8MXJ8 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A23PA8MXZ1 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 DNPH1O43598 174 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 LEPROTL1O95214 131 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 PRSS1P07477 247 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A15PP0C7V4 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A13PP0C7W8 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A14PP0C7W9 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 FAM90A24PP0C7X0 464 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 MPV17P39210 176 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 TNFAIP6P98066 277 aaPredicted RBP13.23□□□□□ -0.29
USP43-201ENST00000285199 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
USP43-201ENST00000285199 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 TMEM208Q9BTX3 173 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 MAP1LC3CQ9BXW4 147 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 TNCP24821 2201 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 CLEC3BP05452 202 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 CSN1S1P47710 185 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 LCN2P80188 198 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 PRNTQ86SH4 94 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 ZBTB34Q8NCN2 500 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 KLF14Q8TD94 323 aaPredicted RBP13.23□□□□□ -0.29
USP43-201ENST00000285199 SPSB4Q96A44 273 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
USP43-201ENST00000285199 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
USP43-201ENST00000285199 DCAF10Q5QP82 559 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 VENTXO95231 258 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 MAS1LP35410 378 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 AMMECR1Q9Y4X0 333 aaPredicted RBP13.22□□□□□ -0.29
USP43-201ENST00000285199 hADV38S2A0JD32 116 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 PMCHL1Q16048 86 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 TM4SF20Q53R12 229 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 GBGT1Q8N5D6 347 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 FAM222BQ8WU58 562 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 WDR54Q9H977 334 aa13.22□□□□□ -0.29
USP43-201ENST00000285199 CA2P00918 260 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.29
USP43-201ENST00000285199 ASPHD1Q5U4P2 390 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 PEAR1Q5VY43 1037 aaPredicted RBP13.21□□□□□ -0.29
USP43-201ENST00000285199 OR2V2Q96R30 315 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 TEX50A0A1B0GTY4 177 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 HLA-DQA1P01909 254 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 NPSP0C0P6 89 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 CRYGSP22914 178 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 PRB3Q04118 309 aaPredicted RBP13.21□□□□□ -0.29
USP43-201ENST00000285199 PRSS8Q16651 343 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 MBD3L1Q8WWY6 194 aa13.21□□□□□ -0.29
USP43-201ENST00000285199 MCRIP2Q9BUT9 160 aaKnown RBP13.21□□□□□ -0.29
USP43-201ENST00000285199 FAM90A26D6RGX4 464 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 J3KRW8 73 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 DLEU1O43261 78 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 ADH4P08319 380 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 KLF3P57682 345 aaPredicted RBP13.21□□□□□ -0.3
USP43-201ENST00000285199 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 LINC01551Q86U37 167 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 YLPM1P49750 1951 aaKnown RBP13.21□□□□□ -0.3
USP43-201ENST00000285199 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 B4E171 279 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 TSPAN7P41732 249 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 IL36BQ9NZH7 164 aa13.21□□□□□ -0.3
USP43-201ENST00000285199 F11RQ9Y624 299 aaKnown RBP13.21□□□□□ -0.3
USP43-201ENST00000285199 PLXNB1O43157 2135 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
USP43-201ENST00000285199 TIMP3P35625 211 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 FAM162BQ5T6X4 162 aa13.2□□□□□ -0.3
USP43-201ENST00000285199 ZNF324BQ6AW86 544 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms