RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 C14orf144Q96I85 54 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 DERL1Q9BUN8 251 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 P2RY4P51582 365 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 A0A0U1RRA0 63 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 BGLAPP02818 100 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 CELA2AP08217 269 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 CTAG1AP78358 180 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 RTN4RL2Q86UN3 420 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 C9orf62Q8N4C0 152 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 SH3BGRL3Q9H299 93 aa9.75□□□□□ -0.85
PTPN4-201ENST00000263708 NPIPB8E9PQR5 432 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 NPIPB9F8W1W9 429 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 NPIPB7O75200 414 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 LINC00614P0C842 121 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 ANAPC13Q9BS18 74 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 CXCL10P02778 98 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 CD300LDQ6UXZ3 194 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 FGFRL1Q8N441 504 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM86BQ8N661 226 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 JPT2Q9H910 190 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TCRBV4S1A1TA0A5B7 111 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM174Q8WUU8 243 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 ZG16O60844 167 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 LINC00158P58513 81 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TNFRSF9Q07011 255 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM222Q9H0R3 208 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TRBV9A0A0B4J1U6 114 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TRAV2A0A0B4J234 112 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TCRBV5S1A1TA0A578 114 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 IL11P20809 199 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 SCARF2Q96GP6 870 aaPredicted RBP9.74□□□□□ -0.85
PTPN4-201ENST00000263708 NRTNQ99748 197 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
PTPN4-201ENST00000263708 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 MRPL32Q9BYC8 188 aaKnown RBP9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM30AQ9NV96 361 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 PAPPA2Q9BXP8 1791 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 INSP01308 110 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM167AQ8TBQ9 72 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 FBXL7Q9UJT9 491 aa9.74□□□□□ -0.85
PTPN4-201ENST00000263708 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 PAX1P15863 534 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 CBLN1P23435 193 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 IFI27P40305 119 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-201ENST00000263708 PCP4P48539 62 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF146Q15072 292 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-201ENST00000263708 SIGLEC5O15389 551 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 TTC9CQ8N5M4 171 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 OR9G1Q8NH87 305 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 C1QL1O75973 258 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF818PQ6ZRF7 136 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 SSBP4Q9BWG4 385 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-201ENST00000263708 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
PTPN4-201ENST00000263708 CYB5R2Q6BCY4 276 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 VN1R4Q7Z5H5 301 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 NAPSAO96009 420 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 IGHV3-11P01762 117 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF345Q14585 488 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 DPRXA6NFQ7 191 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 C19orf67A6NJJ6 358 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 PGLYRP1O75594 196 aaPredicted RBP9.73□□□□□ -0.85
PTPN4-201ENST00000263708 IGHV1-45A0A0A0MS14 117 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 DDTP30046 118 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 FOXL2P58012 376 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF831Q5JPB2 1677 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
PTPN4-201ENST00000263708 RBBP6Q7Z6E9 1792 aaKnown RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 RREB1Q92766 1687 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 HBDP02042 147 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 MS4A6AQ9H2W1 248 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 G6PC2Q9NQR9 355 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 RGPD3A6NKT7 1758 aaPredicted RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 PPP1R27Q86WC6 154 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 GZMBP10144 247 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 CYP2G1PQ6ZSU1 146 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 DUSP15Q9H1R2 295 aaPredicted RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 HSPE1P61604 102 aaKnown RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 SELENOHQ8IZQ5 122 aaKnown RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 ARPC1AQ92747 370 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 TMEM186Q96B77 213 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 GVINP1Q7Z2Y8 2422 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 TRPM3Q9HCF6 1732 aaPredicted RBP9.72□□□□□ -0.85
PTPN4-201ENST00000263708 CD28P10747 220 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 ZNF721Q8TF20 911 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
PTPN4-201ENST00000263708 CACNA1IQ9P0X4 2223 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 TXNDC17Q9BRA2 123 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 FREM3P0C091 2139 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 TOMM40O96008 361 aa9.71□□□□□ -0.85
PTPN4-201ENST00000263708 CISD3P0C7P0 127 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms