RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 PKDREJQ9NTG1 2253 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 H0YJW9 148 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 OPRK1P41145 380 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 PSMB3P49720 205 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 DLX6P56179 175 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 PRCDQ00LT1 54 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 SLC35E3Q7Z769 313 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 TMEM170AQ8WVE7 144 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 HARBI1Q96MB7 349 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 PLEKHA3Q9HB20 300 aa10.55□□□□□ -0.72
SPTLC1-201ENST00000262554 A0A087X0M5 115 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 A0A1B0GX30 115 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 SRRM4A7MD48 611 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 HMGB3O15347 200 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 CA2P00918 260 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 MT-ND4LP03901 98 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 CRYBA1P05813 215 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 SAA1P0DJI8 122 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 CDC34P49427 236 aaPredicted RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 PPOXP50336 477 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 Q8N7P7 452 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 NPVFQ9HCQ7 196 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 MANBALQ9NQG1 85 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 KCNIP2Q9NS61 270 aa10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 RALYQ9UKM9 306 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-201ENST00000262554 A0A087WWC5 75 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 EIF3GO75821 320 aaKnown RBP eCLIP10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 FSTL3O95633 263 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 IGHV1-8P0DP01 117 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 SFTPCP11686 197 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 FOLR2P14207 255 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 COL8A2P25067 703 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 TMEM177Q53S58 311 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 FAM90A2PQ658T7 463 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 PDPNQ86YL7 162 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 HIST1H2BAQ96A08 127 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 ISOC2Q96AB3 205 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 A0A1W2PPE2 198 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 A0A1W2PPH5 198 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 SEC14L6B5MCN3 397 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 LYNX1G3V0Z9 82 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 OR2C1O95371 312 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 LYNX1P0DP58 116 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 MYOD1P15172 320 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 CTRB1P17538 263 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 IL3RAP26951 378 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 REG1BP48304 166 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 ATP5IP56385 69 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 CDSNQ15517 529 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 RNF212Q495C1 297 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 CTRB2Q6GPI1 263 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 OR4C13Q8NGP0 309 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 NEIL1Q96FI4 390 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 MGST2Q99735 147 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
SPTLC1-201ENST00000262554 IGF2RP11717 2491 aa10.52□□□□□ -0.72
SPTLC1-201ENST00000262554 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 A0A1W2PPV4 95 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 B4DEV8 164 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 C1QTNF9P0C862 333 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 ZNF137PP52743 207 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 PNRC1Q12796 327 aaPredicted RBP10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 IQCF2Q8IXL9 164 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 OR4A5Q8NH83 315 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 VSTM2AQ8TAG5 236 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB1CQ92928 201 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 ST6GALNAC6Q969X2 333 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 GGTLC1Q9BX51 225 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 TMEM133Q9H2Q1 129 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 TMPRSS5Q9H3S3 457 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 PXMP4Q9Y6I8 212 aa10.52□□□□□ -0.73
SPTLC1-201ENST00000262554 FNDC10F2Z333 226 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 OPN1MWP04001 364 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 OPN1MW2P0DN77 364 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 OPN1MW3P0DN78 364 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 USF1P22415 310 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB13P51153 203 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB31Q13636 194 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 ARSJQ5FYB0 599 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 TEPPQ6URK8 271 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 WASHC3Q9Y3C0 194 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 LSM4Q9Y4Z0 139 aaKnown RBP10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 MC5RP33032 325 aa10.51□□□□□ -0.73
SPTLC1-201ENST00000262554 PLA2G5P39877 138 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms