RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 COA4Q9NYJ1 87 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 PRNDQ9UKY0 176 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 FOXA2Q9Y261 457 aaPredicted RBP11.11□□□□□ -0.63
VPS25-201ENST00000253794 ZNF257Q9Y2Q1 563 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 FBXO7Q9Y3I1 522 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
VPS25-201ENST00000253794 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 ANK2Q01484 3957 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 A0A0B4J293 547 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 SNRPGP15A8MWD9 76 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 SNAPC5O75971 98 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 SLC25A6P12236 298 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 RAB25P57735 213 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 TNXAQ16473 311 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 AKIRIN2Q53H80 203 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
VPS25-201ENST00000253794 LYZL2Q7Z4W2 148 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 MINDY2Q8NBR6 621 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 OR5B3Q8NH48 314 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 CASTOR1Q8WTX7 329 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 CHPT1Q8WUD6 406 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 SRSF12Q8WXF0 261 aaKnown RBP11.1□□□□□ -0.63
VPS25-201ENST00000253794 PHB2Q99623 299 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 SRSF8Q9BRL6 282 aaKnown RBP11.1□□□□□ -0.63
VPS25-201ENST00000253794 GON7Q9BXV9 100 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 PRR13Q9NZ81 148 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 RNF114Q9Y508 228 aa11.1□□□□□ -0.63
VPS25-201ENST00000253794 C7orf66A4D0T2 115 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 CGB1A6NKQ9 187 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 TEX22C9J3V5 150 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 ACTL6BO94805 426 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 DHFRP00374 187 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 PPIFP30405 207 aaKnown RBP11.09□□□□□ -0.63
VPS25-201ENST00000253794 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
VPS25-201ENST00000253794 OR2B8PP59922 312 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 PDLIM3Q53GG5 364 aaPredicted RBP11.09□□□□□ -0.63
VPS25-201ENST00000253794 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 Q6ZRM9 215 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 GPR146Q96CH1 333 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 SEC22CQ9BRL7 303 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 GPN1Q9HCN4 374 aaPredicted RBP11.09□□□□□ -0.63
VPS25-201ENST00000253794 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 CACFD1Q9UGQ2 172 aa11.09□□□□□ -0.63
VPS25-201ENST00000253794 PLXNB1O43157 2135 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 TRAV41A0A0B4J266 112 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 TEX50A0A1B0GTY4 177 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 A0A1B0GU03 582 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 A0A1B0GW64 132 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 E7EUB6 86 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 CNIH1O95406 144 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 BRI3O95415 125 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 HSPE1P61604 102 aaKnown RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 GNB1P62873 340 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 TMEM267Q0VDI3 215 aaPredicted RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 C10orf55Q5SWW7 151 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 HSD17B13Q7Z5P4 300 aaPredicted RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 RNF152Q8N8N0 203 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 OR1L8Q8NGR8 309 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 NOL4LQ96MY1 436 aaPredicted RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 COMMD5Q9GZQ3 224 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 NDUFA4L2Q9NRX3 87 aa11.08□□□□□ -0.64
VPS25-201ENST00000253794 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
VPS25-201ENST00000253794 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 PITX3O75364 302 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 IGHG4P01861 327 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 IZUMO4Q1ZYL8 232 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 KLK9Q2XQG4 91 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 C12orf45Q8N5I9 185 aaPredicted RBP11.07□□□□□ -0.64
VPS25-201ENST00000253794 COMMD1Q8N668 190 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 KLHDC1Q8N7A1 406 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 RNASE11Q8TAA1 199 aaKnown RBP11.07□□□□□ -0.64
VPS25-201ENST00000253794 GRPEL2Q8TAA5 225 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 WFDC12Q8WWY7 111 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 QTRT1Q9BXR0 403 aaKnown RBP11.07□□□□□ -0.64
VPS25-201ENST00000253794 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 NSG2Q9Y328 171 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
VPS25-201ENST00000253794 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 TRAPPC2P0DI81 140 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 TRAPPC2BP0DI82 140 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 MYOD1P15172 320 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 SLC35B1P78383 322 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 PRCDQ00LT1 54 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 SMCO1Q147U7 214 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 TATDN3Q17R31 274 aa11.06□□□□□ -0.64
VPS25-201ENST00000253794 GGNBP1Q5YKI7 109 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms