RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 RER1O15258 196 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 NTF3P20783 257 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 TSKUQ8WUA8 353 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 ZNF837Q96EG3 531 aaPredicted RBP16.6■□□□□ 0.25
HOXC13-201ENST00000243056 OXGR1Q96P68 337 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 KALRNO60229 2985 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 ZNF816-ZNF321PA0A0X1KG74 233 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 IGHV3-9P01782 118 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 PSG7Q13046 419 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 SCGB2A2Q13296 93 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 HIST3H3Q16695 136 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 OR10J3Q5JRS4 329 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 Q6ZRM9 215 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 C19orf35Q6ZS72 473 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 BORCS7Q96B45 105 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 KIAA1549Q9HCM3 1950 aa16.6■□□□□ 0.25
HOXC13-201ENST00000243056 NBASA2RRP1 2371 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 GPR6P46095 362 aaPredicted RBP16.59■□□□□ 0.25
HOXC13-201ENST00000243056 RAC3P60763 192 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 RHOBP62745 196 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 Q56UQ5 140 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
HOXC13-201ENST00000243056 OR10P1Q8NGE3 313 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 OR1K1Q8NGR3 316 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 APOBEC3DQ96AK3 386 aaPredicted RBP16.59■□□□□ 0.25
HOXC13-201ENST00000243056 MRPL13Q9BYD1 178 aaKnown RBP16.59■□□□□ 0.25
HOXC13-201ENST00000243056 IGKV1D-13A0A0B4J2D9 117 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 IGKV1-13P0DP09 117 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 PDCD1Q15116 288 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 PIGYQ3MUY2 71 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 ZDHHC23Q8IYP9 409 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 PNRC2Q9NPJ4 139 aaKnown RBP16.59■□□□□ 0.25
HOXC13-201ENST00000243056 PLSCR4Q9NRQ2 329 aa16.59■□□□□ 0.25
HOXC13-201ENST00000243056 M0R1X1 148 aa16.58■□□□□ 0.25
HOXC13-201ENST00000243056 SIRPB1O00241 398 aa16.58■□□□□ 0.25
HOXC13-201ENST00000243056 DAP3P51398 398 aaKnown RBP16.58■□□□□ 0.25
HOXC13-201ENST00000243056 HBG1P69891 147 aa16.58■□□□□ 0.25
HOXC13-201ENST00000243056 HBG2P69892 147 aa16.58■□□□□ 0.25
HOXC13-201ENST00000243056 SPATA12Q7Z6I5 190 aa16.58■□□□□ 0.25
HOXC13-201ENST00000243056 TRAV9-1A0A075B6T8 112 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 TRAV17A0A0B4J275 112 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 NPIPA3F8WFD2 350 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 J3QR06 171 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 ZADH2Q8N4Q0 377 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 OR5D13Q8NGL4 314 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 SPSB1Q96BD6 273 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 TIMM9Q9Y5J7 89 aa16.58■□□□□ 0.24
HOXC13-201ENST00000243056 TRGV5A0A0B4J1U4 118 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 A0A1B0GV72 72 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 SYNGR2O43760 224 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 FAM87AP0C7U9 286 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 CLRN1P58418 232 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 UFSP1Q6NVU6 142 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 RBMXL3Q8N7X1 1067 aaKnown RBP16.57■□□□□ 0.24
HOXC13-201ENST00000243056 CA7P43166 264 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 EBLN2Q6P2I7 272 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 OCC1Q8TAD7 63 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 NAT8BQ9UHF3 227 aa16.57■□□□□ 0.24
HOXC13-201ENST00000243056 SLC22A20A6NK97 555 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 DEGS1O15121 323 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 PDE6DO43924 150 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 FKBP2P26885 142 aaKnown RBP16.56■□□□□ 0.24
HOXC13-201ENST00000243056 SELENOVP59797 346 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 SLC38A11Q08AI6 406 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 GNB1LQ9BYB4 327 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 ZNF716A6NP11 495 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 K7ENP7 123 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 SRIP30626 198 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 ARF1P84077 181 aaKnown RBP16.56■□□□□ 0.24
HOXC13-201ENST00000243056 INO80CQ6PI98 192 aaPredicted RBP16.56■□□□□ 0.24
HOXC13-201ENST00000243056 IL36GQ9NZH8 169 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 PEF1Q9UBV8 284 aaKnown RBP16.56■□□□□ 0.24
HOXC13-201ENST00000243056 PIGLQ9Y2B2 252 aa16.56■□□□□ 0.24
HOXC13-201ENST00000243056 CD5LO43866 347 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 AZU1P20160 251 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 TBR1Q16650 682 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 SPANXN5Q5MJ07 72 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 ADGRG4Q8IZF6 3080 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 ACACBO00763 2458 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 SPINK4O60575 86 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 IGLV3-1P01715 115 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 OTX1P32242 354 aaPredicted RBP16.55■□□□□ 0.24
HOXC13-201ENST00000243056 ATP6V0BQ99437 205 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 QTRT1Q9BXR0 403 aaKnown RBP16.55■□□□□ 0.24
HOXC13-201ENST00000243056 TMEM38BQ9NVV0 291 aa16.55■□□□□ 0.24
HOXC13-201ENST00000243056 GAGE10A6NGK3 116 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 K7EN84 100 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 CACNG5Q9UF02 275 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 GTF3C1Q12789 2109 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 TRBV9A0A0B4J1U6 114 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 H0Y980 276 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 SSTR5P35346 364 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 C9orf135Q5VTT2 229 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 TUSC5Q8IXB3 177 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 OR8I2Q8N0Y5 310 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 STXBP6Q8NFX7 210 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 GP6Q9HCN6 339 aa16.54■□□□□ 0.24
HOXC13-201ENST00000243056 NPVFQ9HCQ7 196 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms