RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 ZNF486Q96H40 463 aaPredicted RBP12.86□□□□□ -0.35
CLTA-201ENST00000242285 HRASLSQ9HDD0 168 aa12.86□□□□□ -0.35
CLTA-201ENST00000242285 AKIP1Q9NQ31 210 aa12.86□□□□□ -0.35
CLTA-201ENST00000242285 TMEM140Q9NV12 185 aa12.86□□□□□ -0.35
CLTA-201ENST00000242285 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
CLTA-201ENST00000242285 KLK11Q9UBX7 282 aa12.86□□□□□ -0.35
CLTA-201ENST00000242285 NBEAL2Q6ZNJ1 2754 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 TENM3Q9P273 2699 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 E7EUB6 86 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 CTDSPLO15194 276 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 RGS5O15539 181 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 NOL3O60936 208 aaKnown RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 RBMXL2O75526 392 aaKnown RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 DHFRP00374 187 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 CD74P04233 296 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 PTBP1P26599 531 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLTA-201ENST00000242285 ERVK-16P61578 105 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 KLF5Q13887 457 aaPredicted RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 LHFPL1Q86WI0 220 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 LAX1Q8IWV1 398 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 DMBX1Q8NFW5 382 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 FCAMRQ8WWV6 532 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 FYTTD1Q96QD9 318 aaKnown RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 ELOVL1Q9BW60 279 aa12.85□□□□□ -0.35
CLTA-201ENST00000242285 ZNF256Q9Y2P7 627 aaPredicted RBP12.85□□□□□ -0.35
CLTA-201ENST00000242285 DPPA5A6NC42 116 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 HMX3A6NHT5 357 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 H3BMQ9 156 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 CTDSP2O14595 271 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 SAP30O75446 220 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 IFNA6P05013 189 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 HIST1H1BP16401 226 aaKnown RBP12.84□□□□□ -0.35
CLTA-201ENST00000242285 CTRB1P17538 263 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 PSMB6P28072 239 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 ECI1P42126 302 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 TAS2R19P59542 299 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 OR2B8PP59922 312 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 RND3P61587 244 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
CLTA-201ENST00000242285 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 OR6Q1Q8NGQ2 317 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 COMMD5Q9GZQ3 224 aa12.84□□□□□ -0.35
CLTA-201ENST00000242285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
CLTA-201ENST00000242285 CGB1A6NKQ9 187 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 CD3DP04234 171 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 LPAR6P43657 344 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 EXOSC2Q13868 293 aaKnown RBP12.83□□□□□ -0.36
CLTA-201ENST00000242285 SMIM4Q8WVI0 70 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 ISOC1Q96CN7 298 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 LSM4Q9Y4Z0 139 aaKnown RBP12.83□□□□□ -0.36
CLTA-201ENST00000242285 RYR3Q15413 4870 aa12.83□□□□□ -0.36
CLTA-201ENST00000242285 IGLC7A0M8Q6 106 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 ANKRD34BA5PLL1 514 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 M0QYG6 137 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 AREGP15514 252 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 RPA2P15927 270 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 TATDN3Q17R31 274 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 RPEL1Q2QD12 228 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 C15orf32Q32M92 178 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 DIRAS2Q96HU8 199 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 QTRT1Q9BXR0 403 aaKnown RBP12.82□□□□□ -0.36
CLTA-201ENST00000242285 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
CLTA-201ENST00000242285 NXF2Q9GZY0 626 aaKnown RBP12.82□□□□□ -0.36
CLTA-201ENST00000242285 SIGLEC8Q9NYZ4 499 aa12.82□□□□□ -0.36
CLTA-201ENST00000242285 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 PRH1P02810 166 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 DEFA5Q01523 94 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 MEF2DQ14814 521 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 PHLDA2Q53GA4 152 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 TBC1D26Q86UD7 250 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 TERB2Q8NHR7 220 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 FKBP11Q9NYL4 201 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 PRNDQ9UKY0 176 aa12.81□□□□□ -0.36
CLTA-201ENST00000242285 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 OR2J3O76001 311 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 KRASP01116 189 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 IGLV1-51P01701 117 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 TRBV12-3P01733 135 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 RNASE12Q5GAN4 147 aaKnown RBP12.8□□□□□ -0.36
CLTA-201ENST00000242285 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 OR5B3Q8NH48 314 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 SEC22AQ96IW7 307 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 PRR25Q96S07 402 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 CEPT1Q9Y6K0 416 aa12.8□□□□□ -0.36
CLTA-201ENST00000242285 BMPR1BO00238 502 aa12.79□□□□□ -0.36
CLTA-201ENST00000242285 CYB5BO43169 146 aa12.79□□□□□ -0.36
CLTA-201ENST00000242285 GSTZ1O43708 216 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms