RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PPIAL4CA0A0B4J2A2 164 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 PPIAL4GP0DN37 164 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 REG1BP48304 166 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 ATP5IP56385 69 aaPredicted RBP18.92■□□□□ 0.62
MSX2-201ENST00000239243 KHDC3LQ587J8 217 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 WDR25Q64LD2 544 aaPredicted RBP18.92■□□□□ 0.62
MSX2-201ENST00000239243 OR4A5Q8NH83 315 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 RARRES2Q99969 163 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 PRSS46E5RG02 174 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 HSPB1P04792 205 aaKnown RBP18.92■□□□□ 0.62
MSX2-201ENST00000239243 UQCRFS1P47985 274 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 ZNF726P1Q15940 193 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 HAGHQ16775 308 aa18.92■□□□□ 0.62
MSX2-201ENST00000239243 FAM74A7A6NL05 159 aa18.91■□□□□ 0.62
MSX2-201ENST00000239243 NPBWR1P48145 328 aa18.91■□□□□ 0.62
MSX2-201ENST00000239243 FAM74A3Q4VXF1 159 aa18.91■□□□□ 0.62
MSX2-201ENST00000239243 FFAR4Q5NUL3 377 aa18.91■□□□□ 0.62
MSX2-201ENST00000239243 SLC39A9Q9NUM3 307 aa18.91■□□□□ 0.62
MSX2-201ENST00000239243 IGHV2-26A0A0B4J1V2 119 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 MAP1LC3B2A6NCE7 125 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 NUPL2O15504 423 aaKnown RBP18.9■□□□□ 0.62
MSX2-201ENST00000239243 USF1P22415 310 aaPredicted RBP18.9■□□□□ 0.62
MSX2-201ENST00000239243 ACSM6Q6P461 480 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 LCN15Q6UWW0 184 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 HINT2Q9BX68 163 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 MAP1LC3BQ9GZQ8 125 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 CHODLQ9H9P2 273 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 CLEC7AQ9BXN2 247 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 SMG1Q96Q15 3661 aaKnown RBP18.9■□□□□ 0.62
MSX2-201ENST00000239243 ABCA4P78363 2273 aa18.9■□□□□ 0.62
MSX2-201ENST00000239243 SMCO3A2RU48 225 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 SOHLH1Q5JUK2 328 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 RPP25LQ8N5L8 163 aaKnown RBP18.89■□□□□ 0.61
MSX2-201ENST00000239243 OR10G4Q8NGN3 311 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 OR10G9Q8NGN4 311 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 OR10G7Q8NGN6 311 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 TMEM170AQ8WVE7 144 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 ITPR1Q14643 2758 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 CTXND1A0A1B0GTU2 59 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 TEX50A0A1B0GTY4 177 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 IFNA1P01562 189 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 LIPFP07098 398 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 PMS2P11Q13670 270 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 ICAM4Q14773 271 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 HLA-DRB5Q30154 266 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 BEND2Q8NDZ0 799 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 ACTR3CQ9C0K3 210 aaPredicted RBP18.89■□□□□ 0.61
MSX2-201ENST00000239243 COMMD5Q9GZQ3 224 aa18.89■□□□□ 0.61
MSX2-201ENST00000239243 HIVEP3Q5T1R4 2406 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 IGLV1-47P01700 117 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 OR13C7P0DN81 318 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 RPL8P62917 257 aaKnown RBP18.88■□□□□ 0.61
MSX2-201ENST00000239243 DIAPH2-AS1Q14236 149 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 HNF4GQ14541 408 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 ACOT6Q3I5F7 207 aaPredicted RBP18.88■□□□□ 0.61
MSX2-201ENST00000239243 LY6G5BQ8NDX9 201 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 TMEM167AQ8TBQ9 72 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 NPVFQ9HCQ7 196 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 KCNIP2Q9NS61 270 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 GNG13Q9P2W3 67 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 AMMECR1Q9Y4X0 333 aaPredicted RBP18.88■□□□□ 0.61
MSX2-201ENST00000239243 LOC102723971A0A1B0GUV8 181 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 LY6HO94772 140 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 IGKV1D-33P01593 117 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 IGKV1-33P01594 117 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 TREML4Q6UXN2 200 aa18.88■□□□□ 0.61
MSX2-201ENST00000239243 FNDC10F2Z333 226 aa18.87■□□□□ 0.61
MSX2-201ENST00000239243 CYB5BO43169 146 aa18.87■□□□□ 0.61
MSX2-201ENST00000239243 CA2P00918 260 aa18.87■□□□□ 0.61
MSX2-201ENST00000239243 SRP19P09132 144 aaKnown RBP18.87■□□□□ 0.61
MSX2-201ENST00000239243 SSX7Q7RTT5 188 aa18.87■□□□□ 0.61
MSX2-201ENST00000239243 TPRP12270 2363 aaKnown RBP18.87■□□□□ 0.61
MSX2-201ENST00000239243 BCL2P10415 239 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 LGALS7P47929 136 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 VMA21Q3ZAQ7 101 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 OR1L8Q8NGR8 309 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 RXFP4Q8TDU9 374 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 PATZ1Q9HBE1 687 aaKnown RBP18.86■□□□□ 0.61
MSX2-201ENST00000239243 MYOD1P15172 320 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 TMEM88Q6PEY1 159 aa18.86■□□□□ 0.61
MSX2-201ENST00000239243 OPRK1P41145 380 aa18.85■□□□□ 0.61
MSX2-201ENST00000239243 FGF8P55075 233 aaPredicted RBP18.85■□□□□ 0.61
MSX2-201ENST00000239243 RBMS3Q6XE24 437 aaKnown RBP18.85■□□□□ 0.61
MSX2-201ENST00000239243 ZFP92A6NM28 416 aa18.85■□□□□ 0.61
MSX2-201ENST00000239243 INS-IGF2F8WCM5 200 aa18.85■□□□□ 0.61
MSX2-201ENST00000239243 BUB1B-PAK6H3BSN5 160 aa18.85■□□□□ 0.61
MSX2-201ENST00000239243 Q8N7P7 452 aa18.85■□□□□ 0.61
MSX2-201ENST00000239243 PKD1L2Q7Z442 2459 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 A0A1W2PN81 502 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 CHRNA7P36544 502 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 TAGLN2P37802 199 aaKnown RBP18.84■□□□□ 0.61
MSX2-201ENST00000239243 C2orf83Q53S99 150 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 P2RX4Q99571 388 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 SLC25A22Q9H936 323 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 NDUFA4L2Q9NRX3 87 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 ONECUT1Q9UBC0 465 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 OPN1MWP04001 364 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 OPN1MW2P0DN77 364 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 OPN1MW3P0DN78 364 aa18.84■□□□□ 0.61
MSX2-201ENST00000239243 RAB31Q13636 194 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms