RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 C15orf61A6NNL5 157 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 NDUFB3O43676 98 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 CRYBA1P05813 215 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 AKIRIN2Q53H80 203 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 LRRC10Q5BKY1 277 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 TMEM200BQ69YZ2 307 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 OR4A47Q6IF82 309 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 LINC01560Q8TB33 94 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 RXFP4Q8TDU9 374 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 KAAG1Q9UBP8 84 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 PKDREJQ9NTG1 2253 aa16.16■□□□□ 0.18
PCDHB11-202ENST00000624887 TET2Q6N021 2002 aaPredicted RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 LOC102723971A0A1B0GUV8 181 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 M0R036 132 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 SNRNP70P08621 437 aaKnown RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 CT45A6P0DMU7 189 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 CT45A5P0DMU8 189 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 CT45A7P0DMV0 189 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 ERVFRD-1P60508 538 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 ACSM6Q6P461 480 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 LYPD2Q6UXB3 125 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 RPP25LQ8N5L8 163 aaKnown RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 NPCDR1Q9BY65 106 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 HEYLQ9NQ87 328 aaPredicted RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 GNG13Q9P2W3 67 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 ZMAT5Q9UDW3 170 aaKnown RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 TCF19Q9Y242 345 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 FOXA2Q9Y261 457 aaPredicted RBP16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 HRASP01112 189 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 IFNA10P01566 189 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 IGKV1D-33P01593 117 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 IGKV1-33P01594 117 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 MBP02144 154 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 CCL3L1P16619 93 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 TFF3Q07654 80 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 LY6DQ14210 128 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 RHEBQ15382 184 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 TMEM14BQ9NUH8 114 aa16.15■□□□□ 0.18
PCDHB11-202ENST00000624887 CACNA1AO00555 2505 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 KALRNO60229 2985 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 IGHV1-69-2A0A0G2JMI3 117 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 PLAUP00749 431 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 SMIM6P0DI80 62 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 OR10G4Q8NGN3 311 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 CISD1Q9NZ45 108 aaKnown RBP16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 ZNRD1Q9P1U0 126 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 CTSZQ9UBR2 303 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 SPTA1P02549 2419 aa16.14■□□□□ 0.17
PCDHB11-202ENST00000624887 MAP1LC3B2A6NCE7 125 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 S100A8P05109 93 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 BCL2P10415 239 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 AKR1C3P42330 323 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 FGF8P55075 233 aaPredicted RBP16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 HNF4GQ14541 408 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 ZNF833PQ6ZTB9 187 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 CYB561D1Q8N8Q1 229 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 H1FXQ92522 213 aaKnown RBP16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 C20orf24Q9BUV8 137 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 MAP1LC3BQ9GZQ8 125 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 SLC39A9Q9NUM3 307 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 COLCA2A8K830 154 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 DVL1O14640 695 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 GRNP28799 593 aaKnown RBP16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 CD1BP29016 333 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 PMS2P11Q13670 270 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 RTL8BQ17RB0 113 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 C15orf54Q8N8G6 183 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 ZNF709Q8N972 641 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 GGACTQ9BVM4 153 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 SLC35D1Q9NTN3 355 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 WDR83OSQ9Y284 106 aa16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 PUS1Q9Y606 427 aaKnown RBP eCLIP16.13■□□□□ 0.17
PCDHB11-202ENST00000624887 RRHO14718 337 aa16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 IL6RP08887 468 aaPredicted RBP16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 FBP1P09467 338 aa16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 HSPE1P61604 102 aaKnown RBP16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 OR13D1Q8NGV5 346 aa16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 TUBA4BQ9H853 241 aa16.12■□□□□ 0.17
PCDHB11-202ENST00000624887 ZFP92A6NM28 416 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 PRSS46E5RG02 174 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 C17orf112F2Z3M2 114 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 LOXP28300 417 aaPredicted RBP16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 RAB5BP61020 215 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 RNF212Q495C1 297 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 FFAR4Q5NUL3 377 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 RAB39BQ96DA2 213 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 SIAH2O43255 324 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 IGKV1-16P04430 117 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 ADORA2A-AS1P86434 159 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 ABHD12Q8N2K0 398 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 Q8N7P7 452 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 OR10G9Q8NGN4 311 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 OR10G7Q8NGN6 311 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 TMEM170AQ8WVE7 144 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 LHX4Q969G2 390 aa16.11■□□□□ 0.17
PCDHB11-202ENST00000624887 CTXND1A0A1B0GTU2 59 aa16.1■□□□□ 0.17
PCDHB11-202ENST00000624887 H3BQ15 152 aa16.1■□□□□ 0.17
PCDHB11-202ENST00000624887 CEBPGP53567 150 aa16.1■□□□□ 0.17
PCDHB11-202ENST00000624887 C8orf31Q8N9H6 132 aa16.1■□□□□ 0.17
PCDHB11-202ENST00000624887 PRNDQ9UKY0 176 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms