RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CISD1Q9NZ45 108 aaKnown RBP14.37□□□□□ -0.11
CNOT3-209ENST00000617930 SLC25A10Q9UBX3 287 aaPredicted RBP14.37□□□□□ -0.11
CNOT3-209ENST00000617930 PPIAL4AQ9Y536 164 aa14.37□□□□□ -0.11
CNOT3-209ENST00000617930 TRAV38-1A0A0B4J264 116 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 LOC102723971A0A1B0GUV8 181 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF727A8MUV8 499 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 RAB29O14966 203 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 C1QL4Q86Z23 238 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 LILRB2Q8N423 598 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 YPEL4Q96NS1 127 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 RSG1Q9BU20 258 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 IDI2-AS1Q9NZ38 188 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 A0A087WWC5 75 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 FAM90A26D6RGX4 464 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 ITGB1BP1O14713 200 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 OR8U8P0C7N1 319 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF672Q499Z4 452 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-209ENST00000617930 SPINK9Q5DT21 86 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 SPANXN5Q5MJ07 72 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 SP5Q6BEB4 398 aaPredicted RBP14.36□□□□□ -0.11
CNOT3-209ENST00000617930 OR4C12Q96R67 309 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF729A6NN14 1252 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-209ENST00000617930 LYNX1G3V0Z9 82 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 LYNX1P0DP58 116 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 CCL3L1P16619 93 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 GNG10P50151 68 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 HBG1P69891 147 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 HBG2P69892 147 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 TMEM200BQ69YZ2 307 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF787Q6DD87 383 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 R3HDM4Q96D70 268 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.35□□□□□ -0.11
CNOT3-209ENST00000617930 GAB2Q9UQC2 676 aa14.35□□□□□ -0.11
CNOT3-209ENST00000617930 KMT2BQ9UMN6 2715 aaPredicted RBP14.34□□□□□ -0.11
CNOT3-209ENST00000617930 TRAV3A0A0B4J244 114 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 TMEM14EPQ6UXP3 125 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 H2BFWTQ7Z2G1 175 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF525Q8N782 197 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF383Q8NA42 475 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 QTRT1Q9BXR0 403 aaKnown RBP14.34□□□□□ -0.11
CNOT3-209ENST00000617930 HIPK2Q9H2X6 1198 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 MS4A5Q9H3V2 200 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 RPUSD1Q9UJJ7 312 aaKnown RBP14.34□□□□□ -0.11
CNOT3-209ENST00000617930 DOPEY1Q5JWR5 2465 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 TRAV1-1A0A0B4J248 108 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 ZFP92A6NM28 416 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 PMS2P5A8MQ11 134 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 VSTM5A8MXK1 200 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 B9A039 149 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 IGFBP2P18065 325 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 KIAA0141Q14154 515 aaPredicted RBP14.34□□□□□ -0.11
CNOT3-209ENST00000617930 ZNF674Q2M3X9 581 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 SSX9Q7RTT3 188 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 SLC35E3Q7Z769 313 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 PSMG3Q9BT73 122 aaPredicted RBP14.34□□□□□ -0.11
CNOT3-209ENST00000617930 SIRT7Q9NRC8 400 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 LINC00312Q9Y6C7 94 aa14.34□□□□□ -0.11
CNOT3-209ENST00000617930 SPTAN1Q13813 2472 aaKnown RBP14.33□□□□□ -0.11
CNOT3-209ENST00000617930 TANC2Q9HCD6 1990 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 MYO18BQ8IUG5 2567 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 CLN5O75503 358 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 HPRT1P00492 218 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 COL8A2P25067 703 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 RPS16P62249 146 aaKnown RBP14.33□□□□□ -0.12
CNOT3-209ENST00000617930 RPL31P62899 125 aaKnown RBP14.33□□□□□ -0.12
CNOT3-209ENST00000617930 LYG1Q8N1E2 194 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 NIT2Q9NQR4 276 aa14.33□□□□□ -0.12
CNOT3-209ENST00000617930 hADV38S2A0JD32 116 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 NKX6-3A6NJ46 265 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 RAB11AP62491 216 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 ZNF343Q6P1L6 599 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 LCN15Q6UWW0 184 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 SLC25A48Q6ZT89 311 aaKnown RBP14.32□□□□□ -0.12
CNOT3-209ENST00000617930 C1orf87Q8N0U7 546 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 OR10G4Q8NGN3 311 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 Q8WTZ3 238 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 RPRMQ9NS64 109 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 URGCP-MRPS24S4R325 110 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 UTP20O75691 2785 aaKnown RBP14.32□□□□□ -0.12
CNOT3-209ENST00000617930 IGHV1-69-2A0A0G2JMI3 117 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 FABP1P07148 127 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 BCL2P10415 239 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 RAB7AP51149 207 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 MRPS11P82912 194 aaKnown RBP14.32□□□□□ -0.12
CNOT3-209ENST00000617930 ELOBQ15370 118 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 AARDQ4LEZ3 155 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 MUC15Q8N387 334 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 VSIRQ9H7M9 311 aa14.32□□□□□ -0.12
CNOT3-209ENST00000617930 CXorf65A6NEN9 183 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 DVL1O14640 695 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 RBFOX2O43251 390 aaKnown RBP eCLIP14.31□□□□□ -0.129e-17■■■■□ 22.8
CNOT3-209ENST00000617930 PPIHO43447 177 aaKnown RBP14.31□□□□□ -0.12
CNOT3-209ENST00000617930 SRSF1Q07955 248 aaKnown RBP eCLIP14.31□□□□□ -0.12
CNOT3-209ENST00000617930 LRRC75BQ2VPJ9 315 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 DTD1Q8TEA8 209 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 S1PR3Q99500 378 aa14.31□□□□□ -0.12
CNOT3-209ENST00000617930 UBR5O95071 2799 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms