RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 FYTTD1Q96QD9 318 aaKnown RBP17.35■□□□□ 0.37
MMP28-203ENST00000612672 GINS4Q9BRT9 223 aa17.35■□□□□ 0.37
MMP28-203ENST00000612672 A0A075B6Q4 140 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 REG1AP05451 166 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 CRYGCP07315 174 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 ZNF735P0CB33 412 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 RPL27AP46776 148 aaKnown RBP17.34■□□□□ 0.37
MMP28-203ENST00000612672 KLK9Q2XQG4 91 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 HES5Q5TA89 166 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 SLC25A42Q86VD7 318 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 PUSL1Q8N0Z8 303 aaKnown RBP17.34■□□□□ 0.37
MMP28-203ENST00000612672 OR1L6Q8NGR2 347 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 PHLDA1Q8WV24 401 aaPredicted RBP17.34■□□□□ 0.37
MMP28-203ENST00000612672 DCUN1D5Q9BTE7 237 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 KLK9Q9UKQ9 250 aa17.34■□□□□ 0.37
MMP28-203ENST00000612672 KLK5Q9Y337 293 aaPredicted RBP17.34■□□□□ 0.37
MMP28-203ENST00000612672 PKD1P98161 4303 aa17.33■□□□□ 0.37
MMP28-203ENST00000612672 IGHV3-35A0A0C4DH35 117 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 KBTBD11O94819 623 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 CTRB1P17538 263 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 MED22Q15528 200 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 ODF3L2Q3SX64 289 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 FAM106AQ4KMX7 169 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 ZNF585BQ52M93 769 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 LGALS9CQ6DKI2 356 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 CTRB2Q6GPI1 263 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 KCTD9Q7L273 389 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 RNF183Q96D59 192 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 OR51E2Q9H255 320 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 SLC2A9Q9NRM0 540 aa17.33■□□□□ 0.36
MMP28-203ENST00000612672 IGKV1D-13A0A0B4J2D9 117 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 RAB27BO00194 218 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 CREBL2O60519 120 aaPredicted RBP17.32■□□□□ 0.36
MMP28-203ENST00000612672 IGKV1-13P0DP09 117 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 ATF4P18848 351 aaPredicted RBP17.32■□□□□ 0.36
MMP28-203ENST00000612672 PSMB6P28072 239 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 MRPS15P82914 257 aaKnown RBP17.32■□□□□ 0.36
MMP28-203ENST00000612672 EIF4EBP1Q13541 118 aaPredicted RBP17.32■□□□□ 0.36
MMP28-203ENST00000612672 IRF3Q14653 427 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 PACRGLQ8N7B6 248 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 ZNF645Q8N7E2 425 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 OR10R2Q8NGX6 335 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 EEF1AKMT3Q96AZ1 226 aa17.32■□□□□ 0.36
MMP28-203ENST00000612672 IGLV11-55A0A075B6I3 123 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 HIST1H1DP16402 221 aaKnown RBP17.31■□□□□ 0.36
MMP28-203ENST00000612672 CALRP27797 417 aaKnown RBP17.31■□□□□ 0.36
MMP28-203ENST00000612672 FCGR2BP31994 310 aaPredicted RBP17.31■□□□□ 0.36
MMP28-203ENST00000612672 ANKRD55Q3KP44 614 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 TMEM167AQ8TBQ9 72 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 UFD1Q92890 307 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 GPHA2Q96T91 129 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 RAB22AQ9UL26 194 aa17.31■□□□□ 0.36
MMP28-203ENST00000612672 RBMX2Q9Y388 322 aaKnown RBP17.31■□□□□ 0.36
MMP28-203ENST00000612672 TRAV25A0A0B4J276 109 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 PTGES3LE9PB15 166 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 CLEC3BP05452 202 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 NFYAP23511 347 aaPredicted RBP17.3■□□□□ 0.36
MMP28-203ENST00000612672 APOC4P55056 127 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 OR4A47Q6IF82 309 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 Q6ZS49 121 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 OR2C3Q8N628 320 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 OR2A7Q96R45 310 aa17.3■□□□□ 0.36
MMP28-203ENST00000612672 RPL35AP18077 110 aaKnown RBP17.29■□□□□ 0.36
MMP28-203ENST00000612672 GPR183P32249 361 aa17.29■□□□□ 0.36
MMP28-203ENST00000612672 OR10A3P58181 314 aa17.29■□□□□ 0.36
MMP28-203ENST00000612672 FABP5Q01469 135 aa17.29■□□□□ 0.36
MMP28-203ENST00000612672 ARFRP1Q13795 201 aa17.29■□□□□ 0.36
MMP28-203ENST00000612672 RBPMS2Q6ZRY4 209 aaKnown RBP17.29■□□□□ 0.36
MMP28-203ENST00000612672 V9GY05 133 aa17.29■□□□□ 0.36
MMP28-203ENST00000612672 HLA-DQB1P01920 261 aa17.28■□□□□ 0.36
MMP28-203ENST00000612672 SSX9Q7RTT3 188 aa17.28■□□□□ 0.36
MMP28-203ENST00000612672 ZNF502Q8TBZ5 544 aa17.28■□□□□ 0.36
MMP28-203ENST00000612672 GATAD1Q8WUU5 269 aa17.28■□□□□ 0.36
MMP28-203ENST00000612672 MARC2Q969Z3 335 aa17.27■□□□□ 0.36
MMP28-203ENST00000612672 SPAG8Q99932 426 aaPredicted RBP17.27■□□□□ 0.36
MMP28-203ENST00000612672 MRPL27Q9P0M9 148 aaKnown RBP17.27■□□□□ 0.36
MMP28-203ENST00000612672 UBE2CO00762 179 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 ARL6IP5O75915 188 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 HSMCR30P0CW71 290 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 NANOS2P60321 138 aaKnown RBP17.26■□□□□ 0.35
MMP28-203ENST00000612672 ZNF124Q15973 351 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 OR4S2Q8NH73 311 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 ZNF436Q9C0F3 470 aaPredicted RBP17.26■□□□□ 0.35
MMP28-203ENST00000612672 C5orf66Q9H5L9 145 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 MRPS7Q9Y2R9 242 aaKnown RBP17.26■□□□□ 0.35
MMP28-203ENST00000612672 PRELID3BQ9Y3B1 194 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 OR2W1Q9Y3N9 320 aa17.26■□□□□ 0.35
MMP28-203ENST00000612672 TRBV7-1A0A0A6YYK4 115 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 KIR2DL5BA0A0G2JN68 375 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 KIR2DL5BA0A0G2JPC4 375 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 TSPAN4O14817 238 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 GALP22466 123 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 CRHBPP24387 322 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 MAS1LP35410 378 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 KIR2DL5AQ8N109 375 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 STPG3Q8N7X2 389 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 KIR2DL5BQ8NHK3 375 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 TCTEX1D2Q8WW35 142 aa17.25■□□□□ 0.35
MMP28-203ENST00000612672 TMEM190Q8WZ59 177 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms