RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 ZNF320A2RRD8 509 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 TMEM213A2RRL7 107 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 KBTBD11O94819 623 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 CD36P16671 472 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 DTYMKP23919 212 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 ARL3P36405 182 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
TVP23A-210ENST00000612195 SSX1Q16384 188 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 TMEM167AQ8TBQ9 72 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 CCDC140Q96MF4 163 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 OR2A7Q96R45 310 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 ATG5Q9H1Y0 275 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 SLC2A9Q9NRM0 540 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 MLXQ9UH92 298 aa12.54□□□□□ -0.4
TVP23A-210ENST00000612195 DNAH10Q8IVF4 4471 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 IGKV1D-13A0A0B4J2D9 117 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 CTXN2P0C2S0 81 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 IGKV1-13P0DP09 117 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 AREGP15514 252 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 CRHBPP24387 322 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 BRWD1-AS2P59051 145 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 ZNF57Q68EA5 555 aaPredicted RBP12.53□□□□□ -0.4
TVP23A-210ENST00000612195 UXS1Q8NBZ7 420 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 OR52B4Q8NGK2 314 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 OR4S2Q8NH73 311 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 OVOL2Q9BRP0 275 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 GGTLC1Q9BX51 225 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 KMT2AQ03164 3969 aa12.53□□□□□ -0.4
TVP23A-210ENST00000612195 SLC22A5O76082 557 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.41
TVP23A-210ENST00000612195 CRYGCP07315 174 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 RAB3BP20337 219 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 MYL9P24844 172 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 PSMB6P28072 239 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 MAS1LP35410 378 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
TVP23A-210ENST00000612195 ARL6IP1Q15041 203 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 NR2C2APQ86WQ0 139 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.41
TVP23A-210ENST00000612195 VSTM2AQ8TAG5 236 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 TCTEX1D2Q8WW35 142 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 SPATA2Q9UM82 520 aa12.52□□□□□ -0.41
TVP23A-210ENST00000612195 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
TVP23A-210ENST00000612195 A8MWP6 167 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 MYOD1P15172 320 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 TM4SF20Q53R12 229 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 GPHA2Q96T91 129 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 HSD17B10Q99714 261 aaKnown RBP12.51□□□□□ -0.41
TVP23A-210ENST00000612195 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
TVP23A-210ENST00000612195 TRDV1A0A1B0GX56 115 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 SMIM30A4D0T7 59 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 DHFRP00374 187 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 REG1AP05451 166 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 CLEC3BP05452 202 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 CTRB1P17538 263 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 KLK9Q2XQG4 91 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 ANKRD55Q3KP44 614 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 BTNL8Q6UX41 500 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 SSX9Q7RTT3 188 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 ZNF367Q7RTV3 350 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 MFSD4AQ8N468 514 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 NUDCD2Q8WVJ2 157 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 DCSTAMPQ9H295 470 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 NDUFB11Q9NX14 153 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 KLK9Q9UKQ9 250 aa12.5□□□□□ -0.41
TVP23A-210ENST00000612195 IGLV11-55A0A075B6I3 123 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 CXorf65A6NEN9 183 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 ANKRD65E5RJM6 399 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 LY6G6CO95867 125 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 DEFA4P12838 97 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
TVP23A-210ENST00000612195 RPL8P62917 257 aaKnown RBP12.49□□□□□ -0.41
TVP23A-210ENST00000612195 PMS2P11Q13670 270 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 TBCEQ15813 527 aaPredicted RBP12.49□□□□□ -0.41
TVP23A-210ENST00000612195 C22orf42Q6IC83 251 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 UNQ9165/PRO28630Q6UXU0 137 aa12.49□□□□□ -0.41
TVP23A-210ENST00000612195 TRBV7-1A0A0A6YYK4 115 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 TMEM235A6NFC5 223 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 MFSD2BA6NFX1 497 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 CGB1A6NKQ9 187 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 SSX5O60225 188 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 HRASP01112 189 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 HLA-GP17693 338 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 EWSR1Q01844 656 aaKnown RBP eCLIP12.48□□□□□ -0.41
TVP23A-210ENST00000612195 ZNF585BQ52M93 769 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 ZNF66Q6ZN08 573 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 ANXA10Q9UJ72 324 aa12.48□□□□□ -0.41
TVP23A-210ENST00000612195 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
TVP23A-210ENST00000612195 IGHV3-35A0A0C4DH35 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms