RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 OR5AC1P0C628 307 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MYL12AP19105 171 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GLRXP35754 106 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 NCS1P62166 190 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 CD164Q04900 197 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 FMODQ06828 376 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 SMAGPQ0VAQ4 97 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 FAM53BQ14153 422 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 SSX1Q16384 188 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 TEX36Q5VZQ5 186 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 RPL22L1Q6P5R6 122 aaKnown RBP3.3□□□□□ -1.88
LINC00397-202ENST00000606785 SLC35E3Q7Z769 313 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MDP1Q86V88 176 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 CALHM3Q86XJ0 350 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 YIPF7Q8N8F6 280 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GATD1Q8NB37 220 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 OR10D4PQ8NGN7 298 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 OR1L8Q8NGR8 309 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GPR146Q96CH1 333 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MRPS24Q96EL2 167 aaKnown RBP3.3□□□□□ -1.88
LINC00397-202ENST00000606785 DIRAS2Q96HU8 199 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 TEX37Q96LM6 180 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 OR4K3Q96R72 315 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MGLLQ99685 303 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GINS4Q9BRT9 223 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 PBDC1Q9BVG4 233 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GGTLC1Q9BX51 225 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 C20orf27Q9GZN8 174 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 FGF23Q9GZV9 251 aaPredicted RBP3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MS4A6AQ9H2W1 248 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 TUBA4BQ9H853 241 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 GPR84Q9NQS5 396 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 SMCO4Q9NRQ5 59 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 CISHQ9NSE2 258 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 UQCC1Q9NVA1 299 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 ZNRD1Q9P1U0 126 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 TBX21Q9UL17 535 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 MCTS1Q9ULC4 181 aaKnown RBP3.3□□□□□ -1.88
LINC00397-202ENST00000606785 PLXND1Q9Y4D7 1925 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 ABCA9Q8IUA7 1624 aa3.3□□□□□ -1.88
LINC00397-202ENST00000606785 PRXQ9BXM0 1461 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SSH2Q76I76 1423 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 MAP2P11137 1827 aaKnown RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 TRAV36DV7A0A075B6V5 113 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 DAPL1A0PJW8 107 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 F5H5K5 113 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 J3KT08 172 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 M0R2Z0 102 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 MFNGO00587 321 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 OR2T1O43869 369 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 MPC2O95563 127 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SERPINE1P05121 402 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SPNP16150 400 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 EVI2AP22794 236 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 RPS3P23396 243 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 AGTR1P30556 359 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 OR1E2P47887 323 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 GNG4P50150 75 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 S100A10P60903 97 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 HSPE1P61604 102 aaKnown RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 HIST1H1AQ02539 215 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 C10orf91Q5T1B1 145 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 C1orf195Q5TG92 126 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 DRAM1Q8N682 238 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 OR4K5Q8NGD3 323 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF431Q8TF32 576 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SRSF12Q8WXF0 261 aaKnown RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 DCUN1D1Q96GG9 259 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF414Q96IQ9 312 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 RNF157Q96PX1 679 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SLC17A9Q9BYT1 436 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SMIM3Q9BZL3 60 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 PLA2G2FQ9BZM2 168 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 POPDC3Q9HBV1 291 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 EXOSC4Q9NPD3 245 aaKnown RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 LYRM2Q9NU23 88 aaPredicted RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 DMAC2Q9NW81 257 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 FBXL12Q9NXK8 326 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 IDI2-AS1Q9NZ38 188 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 SLC23A2Q9UGH3 650 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 HS3ST2Q9Y278 367 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
LINC00397-202ENST00000606785 TMEM14AQ9Y6G1 99 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 ZNF780BQ9Y6R6 833 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 ANKRD26Q9UPS8 1709 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 LAMC1P11047 1609 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 PREX2Q70Z35 1606 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 ZFYVE16Q7Z3T8 1539 aa3.29□□□□□ -1.88
LINC00397-202ENST00000606785 RIC1Q4ADV7 1423 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 PHLPP1O60346 1717 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 POLR1AO95602 1720 aaPredicted RBP3.28□□□□□ -1.88
LINC00397-202ENST00000606785 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 IGKV6D-21A0A0A0MT36 114 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 FABP5P3A8MUU1 101 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 INMT-MINDY4F8WBC2 141 aa3.28□□□□□ -1.88
LINC00397-202ENST00000606785 J3QR89 54 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms