RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 VAMP1P23763 118 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
TGFB1-204ENST00000600196 LY6EQ16553 131 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 PRSS8Q16651 343 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 H2BFWTQ7Z2G1 175 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 ZNF429Q86V71 674 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 LURAP1LQ8IV03 231 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 SELENOHQ8IZQ5 122 aaKnown RBP9.77□□□□□ -0.85
TGFB1-204ENST00000600196 DMBX1Q8NFW5 382 aa9.77□□□□□ -0.85
TGFB1-204ENST00000600196 METTL1Q9UBP6 276 aaKnown RBP9.77□□□□□ -0.85
TGFB1-204ENST00000600196 A0A1B0GU03 582 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 FAM181BA6NEQ2 426 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 UPK2O00526 184 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 SLC25A17O43808 307 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 ACTL6BO94805 426 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 S1PR2O95136 353 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 KRASP01116 189 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 IFNA21P01568 189 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 IGKV1-39P01597 117 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 IGKV1D-39P04432 117 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 IGF1P05019 195 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 SAA1P0DJI8 122 aaPredicted RBP9.76□□□□□ -0.85
TGFB1-204ENST00000600196 ANXA7P20073 488 aaKnown RBP9.76□□□□□ -0.85
TGFB1-204ENST00000600196 CD24P25063 80 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 PAX6P26367 422 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM267Q0VDI3 215 aaPredicted RBP9.76□□□□□ -0.85
TGFB1-204ENST00000600196 SP6Q3SY56 376 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 FOXRED2Q8IWF2 684 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 MRPL41Q8IXM3 137 aaKnown RBP9.76□□□□□ -0.85
TGFB1-204ENST00000600196 OR4F5Q8NH21 305 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 OR5B3Q8NH48 314 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 RITA1Q96K30 269 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 GPHA2Q96T91 129 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 SPIN2AQ99865 258 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 SPIN2BQ9BPZ2 258 aa9.76□□□□□ -0.85
TGFB1-204ENST00000600196 C7orf66A4D0T2 115 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 DBX1A6NMT0 343 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 INS-IGF2F8WCM5 200 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 CHST1O43916 411 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 BRI3O95415 125 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 HKR1P10072 659 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 AKR1C2P52895 323 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 RIPPLY3P57055 190 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 RPL8P62917 257 aaKnown RBP9.75□□□□□ -0.85
TGFB1-204ENST00000600196 PLGLAQ15195 96 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 PDLIM3Q53GG5 364 aaPredicted RBP9.75□□□□□ -0.85
TGFB1-204ENST00000600196 OR2B11Q5JQS5 317 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM268Q5VZI3 342 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM219Q86XT9 240 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 C12orf45Q8N5I9 185 aaPredicted RBP9.75□□□□□ -0.85
TGFB1-204ENST00000600196 OR2T6Q8NHC8 308 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.75□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM89A2RUT3 159 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 FAM90A26D6RGX4 464 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 AP4M1O00189 453 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 G6PCP35575 357 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 COMPP49747 757 aaPredicted RBP9.74□□□□□ -0.85
TGFB1-204ENST00000600196 CX3CL1P78423 397 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 FOXL1Q12952 345 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 AKIRIN2Q53H80 203 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 NMSQ5H8A3 153 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 COMMD1Q8N668 190 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 OR4A16Q8NH70 328 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 COMMD5Q9GZQ3 224 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 OR51J1Q9H342 316 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 FBXL15Q9H469 300 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
TGFB1-204ENST00000600196 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
TGFB1-204ENST00000600196 JMJD1CQ15652 2540 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 IGKV1-5P01602 117 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 SULT1A3P0DMM9 295 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 SULT1A4P0DMN0 295 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 ATP5IP56385 69 aaPredicted RBP9.73□□□□□ -0.85
TGFB1-204ENST00000600196 HSPE1P61604 102 aaKnown RBP9.73□□□□□ -0.85
TGFB1-204ENST00000600196 BLCAPP62952 87 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 RELBQ01201 579 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 ANKRD55Q3KP44 614 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 Q6ZSV7 163 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 SLC35E3Q7Z769 313 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 SLC35G3Q8N808 338 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 SGMS2Q8NHU3 365 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 RNASE11Q8TAA1 199 aaKnown RBP9.73□□□□□ -0.85
TGFB1-204ENST00000600196 LHFPL5Q8TAF8 219 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 CASTOR1Q8WTX7 329 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 WFDC12Q8WWY7 111 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 ASB13Q8WXK3 278 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 ZNF430Q9H8G1 570 aaPredicted RBP9.73□□□□□ -0.85
TGFB1-204ENST00000600196 BEX1Q9HBH7 125 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 ZFP57Q9NU63 452 aa9.73□□□□□ -0.85
TGFB1-204ENST00000600196 C15orf61A6NNL5 157 aa9.72□□□□□ -0.85
TGFB1-204ENST00000600196 CNTFRP26992 372 aa9.72□□□□□ -0.85
TGFB1-204ENST00000600196 CYCSP99999 105 aaKnown RBP9.72□□□□□ -0.85
TGFB1-204ENST00000600196 SMCO1Q147U7 214 aa9.72□□□□□ -0.85
TGFB1-204ENST00000600196 FXYD3Q14802 87 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms