RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SPIN2BQ9BPZ2 258 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 DNAH9Q9NYC9 4486 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 C13orf42A0A1B0GVH6 325 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 FAM25AB3EWG3 89 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 FAM25CB3EWG5 89 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 FAM25GB3EWG6 89 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 TEX22C9J3V5 150 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 IL6RP08887 468 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 CATR1Q13166 79 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 TTC9CQ8N5M4 171 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 OR51H1Q8NH63 302 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 FXYD6Q9H0Q3 95 aa14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 ZMAT5Q9UDW3 170 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-202ENST00000593764 SORL1Q92673 2214 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 TRBV9A0A0B4J1U6 114 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 HMX3A6NHT5 357 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 PGLYRP1O75594 196 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 HPRT1P00492 218 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 PRH1P02810 166 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 RCVRNP35243 200 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 MAS1LP35410 378 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 INSL3P51460 131 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF45Q02386 682 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 POU2AF1Q16633 256 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 DEFB121Q5J5C9 76 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 OR4A47Q6IF82 309 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF343Q6P1L6 599 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 USMG5Q96IX5 58 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 MIXL1Q9H2W2 232 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 BET1LQ9NYM9 111 aa14.21□□□□□ -0.13
SHKBP1-202ENST00000593764 ANKRD34BA5PLL1 514 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 MPPED1O15442 326 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 ZNF735P0CB33 412 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 MYOD1P15172 320 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 RPL27AP46776 148 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 TAS2R31P59538 309 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 ACSM6Q6P461 480 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 CLVS1Q8IUQ0 354 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 CD300LFQ8TDQ1 290 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 BORCS5Q969J3 196 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 ABHD1Q96SE0 405 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 AIFM2Q9BRQ8 373 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 PLEKHA2Q9HB19 425 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 RANGRFQ9HD47 186 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 EXTL2Q9UBQ6 330 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 KLK11Q9UBX7 282 aa14.2□□□□□ -0.14
SHKBP1-202ENST00000593764 COL7A1Q02388 2944 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 TRAV3A0A0B4J244 114 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 CGB1A6NKQ9 187 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 CTDSP2O14595 271 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 TPPPO94811 219 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 S1PR2O95136 353 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 TRBV12-3P01733 135 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 NQO2P16083 231 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 ECI1P42126 302 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 RPL8P62917 257 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 ZNF429Q86V71 674 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 OR52I2Q8NH67 350 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 OR4A5Q8NH83 315 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 AKIP1Q9NQ31 210 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 SLC2A9Q9NRM0 540 aa14.19□□□□□ -0.14
SHKBP1-202ENST00000593764 GPR31O00270 319 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 RLN1P04808 185 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 HLA-GP17693 338 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 F2RP25116 425 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 TMBIM6P55061 237 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 TSPAN5P62079 268 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 RHOGP84095 191 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 KLF5Q13887 457 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 ZNF585BQ52M93 769 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 VAX1Q5SQQ9 334 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 C19orf35Q6ZS72 473 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 RAB2BQ8WUD1 216 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 PRR25Q96S07 402 aa14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 PEF1Q9UBV8 284 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-202ENST00000593764 FAM223BA6NKX1 122 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 M0QYG6 137 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 UPK2O00526 184 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 SAP30O75446 220 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 ZP3P21754 424 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 RPL5P46777 297 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 RNASE12Q5GAN4 147 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 SLC25A42Q86VD7 318 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 FAM223AQ8IWN6 122 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 LAX1Q8IWV1 398 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 CMTM1Q8IZ96 169 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 DYNC2LI1Q8TCX1 351 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 FCAMRQ8WWV6 532 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 DGCR14Q96DF8 476 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 FYTTD1Q96QD9 318 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 BCL7BQ9BQE9 202 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 RSRP1Q9BUV0 290 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 HRASLSQ9HDD0 168 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 COMMD9Q9P000 198 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 MTFP1Q9UDX5 166 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 ZNF257Q9Y2Q1 563 aa14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 LSM4Q9Y4Z0 139 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-202ENST00000593764 NPIPB5A8MRT5 1133 aa14.16□□□□□ -0.14
SHKBP1-202ENST00000593764 CRYGCP07315 174 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms