RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 SEC22AQ96IW7 307 aa12.24□□□□□ -0.45
RPRD1A-208ENST00000589050 BET1LQ9NYM9 111 aa12.24□□□□□ -0.45
RPRD1A-208ENST00000589050 TMEM89A2RUT3 159 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 KCNAB3O43448 404 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 ATG12O94817 140 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 CDS2O95674 445 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 HLA-AP01891 365 aaKnown RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 OR4E1P0C645 316 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 MDKP21741 143 aaPredicted RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 AKR1C2P52895 323 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 RAB25P57735 213 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 CX3CL1P78423 397 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 SRPXP78539 464 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 FOXL1Q12952 345 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 PRSS8Q16651 343 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 MRGPRG-AS1Q2M3A8 158 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 MMD2Q8IY49 270 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 SELENOHQ8IZQ5 122 aaKnown RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 OR4A5Q8NH83 315 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 LHFPL5Q8TAF8 219 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 TMEM167AQ8TBQ9 72 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 CASTOR1Q8WTX7 329 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 RBPMSQ93062 196 aaKnown RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 ALX4Q9H161 411 aaPredicted RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 OR51J1Q9H342 316 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 ZNF430Q9H8G1 570 aaPredicted RBP12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 PARP11Q9NR21 331 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
RPRD1A-208ENST00000589050 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 CLPSL1A2RUU4 121 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 UPK2O00526 184 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 CNIH1O95406 144 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 IGKV1-5P01602 117 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 TNXAQ16473 311 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 ZNF562Q6V9R5 426 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 H2BFWTQ7Z2G1 175 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 LYG2Q86SG7 212 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 FOXRED2Q8IWF2 684 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 LGI3Q8N145 548 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 IL22RA2Q969J5 263 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 SERTAD4Q9NUC0 356 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 RNF114Q9Y508 228 aa12.22□□□□□ -0.45
RPRD1A-208ENST00000589050 TRAV3A0A0B4J244 114 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 A0A1B0GUS0 222 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 AP4M1O00189 453 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 ATP6V0E1O15342 81 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 ACTL6BO94805 426 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 PTTG1O95997 202 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 IL6RP08887 468 aaPredicted RBP12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 SPNP16150 400 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 MECP2P51608 486 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 NDPQ00604 133 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 DHRS2Q13268 280 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 FXYD3Q14802 87 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 ANKRD55Q3KP44 614 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 CADM3Q8N126 398 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 GRPEL2Q8TAA5 225 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 ARPC1AQ92747 370 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 RRNAD1Q96FB5 475 aaKnown RBP12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 LINC00527Q9UJ94 153 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 MMP24Q9Y5R2 645 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 JMJD1CQ15652 2540 aa12.21□□□□□ -0.45
RPRD1A-208ENST00000589050 SNAPC5O75971 98 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 OR9G9P0C7N8 305 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 HLA-GP17693 338 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 MAS1LP35410 378 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 AWAT1Q58HT5 328 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 SLC35G3Q8N808 338 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 OR52B4Q8NGK2 314 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 NOL4LQ96MY1 436 aaPredicted RBP12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
RPRD1A-208ENST00000589050 PIGBOS1A0A0B4J2F0 54 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 INMT-MINDY4F8WBC2 141 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 DUS4LO95620 317 aaKnown RBP12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 P0C879 139 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 COMPP49747 757 aaPredicted RBP12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 OR2B8PP59922 312 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 RGS21Q2M5E4 152 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 LYZL2Q7Z4W2 148 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 STPG2Q8N412 459 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 KLHDC1Q8N7A1 406 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 OR4A16Q8NH70 328 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 COQ8AQ8NI60 647 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 SRSF12Q8WXF0 261 aaKnown RBP12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 SEC22CQ9BRL7 303 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 MARVELD1Q9BSK0 173 aa12.19□□□□□ -0.46
RPRD1A-208ENST00000589050 FAM103A1Q9BTL3 118 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms