RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 ZNF562Q6V9R5 426 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 Q6ZS46 218 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 ZNF695Q8IW36 515 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 OR5AU1Q8NGC0 362 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 OR4A5Q8NH83 315 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 ENKURQ8TC29 256 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 RRNAD1Q96FB5 475 aaKnown RBP10.97□□□□□ -0.65
TRAF4-215ENST00000584944 TSC22D3Q99576 134 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 HSPB9Q9BQS6 159 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 COMMD5Q9GZQ3 224 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 NAA60Q9H7X0 242 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 GPR132Q9UNW8 380 aa10.97□□□□□ -0.65
TRAF4-215ENST00000584944 FAM240BA0A1B0GVZ2 78 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 SRRM4A7MD48 611 aaKnown RBP10.96□□□□□ -0.65
TRAF4-215ENST00000584944 IGLV2-23P01705 113 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 G6PCP35575 357 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 RPL8P62917 257 aaKnown RBP10.96□□□□□ -0.65
TRAF4-215ENST00000584944 PRSS8Q16651 343 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 SP6Q3SY56 376 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 OR4A47Q6IF82 309 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 STPG2Q8N412 459 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 WFDC12Q8WWY7 111 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 NOL4LQ96MY1 436 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-215ENST00000584944 RTBDNQ9BSG5 229 aaPredicted RBP10.96□□□□□ -0.65
TRAF4-215ENST00000584944 C5orf66Q9H5L9 145 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 SERTAD4Q9NUC0 356 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 TMEM140Q9NV12 185 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 LINC00527Q9UJ94 153 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 VSIG4Q9Y279 399 aa10.96□□□□□ -0.65
TRAF4-215ENST00000584944 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 TRAV41A0A0B4J266 112 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 CRYM-AS1A6NIL9 109 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 FCN1O00602 326 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 FBXO24O75426 580 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 NDUFB6O95139 128 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 OR5AC1P0C628 307 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 MAS1LP35410 378 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 PROK1P58294 105 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 PJVKQ0ZLH3 352 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 C4orf46Q504U0 113 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 TMEM128Q5BJH2 165 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 COMMD1Q8N668 190 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 ADAD2Q8NCV1 583 aaKnown RBP10.95□□□□□ -0.66
TRAF4-215ENST00000584944 OR4A16Q8NH70 328 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 TP53RKQ96S44 253 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 SPIN2BQ9BPZ2 258 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 PDCD10Q9BUL8 212 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 TMEM222Q9H0R3 208 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 ZNF430Q9H8G1 570 aaPredicted RBP10.95□□□□□ -0.66
TRAF4-215ENST00000584944 ZNF355PQ9NSJ1 428 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 WSB1Q9Y6I7 421 aa10.95□□□□□ -0.66
TRAF4-215ENST00000584944 HLA-GP17693 338 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 BRWD1-AS2P59051 145 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 CXorf66Q5JRM2 361 aaPredicted RBP10.94□□□□□ -0.66
TRAF4-215ENST00000584944 TEX38Q6PEX7 206 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 ZNF329Q86UD4 541 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 MRPL41Q8IXM3 137 aaKnown RBP10.94□□□□□ -0.66
TRAF4-215ENST00000584944 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 MRGPRFQ96AM1 343 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 FYTTD1Q96QD9 318 aaKnown RBP10.94□□□□□ -0.66
TRAF4-215ENST00000584944 HINT2Q9BX68 163 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 BET1LQ9NYM9 111 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
TRAF4-215ENST00000584944 TCRBV4S1A1TA0A5B7 111 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 LINC01548A6NM66 108 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 ARPC1BO15143 372 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 OPN1MWP04001 364 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 IGF1P05019 195 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 OPN1MW2P0DN77 364 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 OPN1MW3P0DN78 364 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 UBE2MP61081 183 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 ASAH1Q13510 395 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 ZNF585BQ52M93 769 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 TMEM268Q5VZI3 342 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 PUSL1Q8N0Z8 303 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 CASTOR1Q8WTX7 329 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 RBPMSQ93062 196 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 TMEM68Q96MH6 324 aa10.93□□□□□ -0.66
TRAF4-215ENST00000584944 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
TRAF4-215ENST00000584944 A0A1W2PN81 502 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 MSGN1A6NI15 193 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 UPK2O00526 184 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 PLA2G10O15496 165 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 DHFRP00374 187 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 HLA-AP01891 365 aaKnown RBP10.92□□□□□ -0.66
TRAF4-215ENST00000584944 CRYGBP07316 175 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 PF4V1P10720 104 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 UCP1P25874 307 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 CHRNA7P36544 502 aa10.92□□□□□ -0.66
TRAF4-215ENST00000584944 RPL27AP46776 148 aaKnown RBP10.92□□□□□ -0.66
TRAF4-215ENST00000584944 MECP2P51608 486 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms