RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 ACOT12Q8WYK0 555 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 GNPNAT1Q96EK6 184 aaPredicted RBP0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 ANKRD36BP1Q96IX9 119 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 CCL13Q99616 98 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 DERL2Q9GZP9 239 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 C22orf24Q9Y442 160 aa0.76□□□□□ -2.29
SMCHD1-207ENST00000581711 NUP160Q12769 1436 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 IGKV2D-26A0A0A0MRZ7 120 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 MEIS3P1A6NDR6 274 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 IBA57-AS1B1ANH7 110 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 ATP8B1O43520 1251 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 NSA2O95478 260 aaKnown RBP0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 IL9P15248 144 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 ELOBQ15370 118 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 PLPPR5Q32ZL2 321 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 C9orf64Q5T6V5 341 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 FAM27BQ5VT28 67 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 DNM1P34Q6PK57 102 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 EEF1AKMT1Q8WVE0 214 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 CHST6Q9GZX3 395 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 CXorf21Q9HAI6 301 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 MED9Q9NWA0 146 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 EURLQ9NYK6 297 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 COQ4Q9Y3A0 265 aa0.75□□□□□ -2.29
SMCHD1-207ENST00000581711 GLI3P10071 1580 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 KIF24Q5T7B8 1368 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 OR51F1A6NGY5 319 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 APOMO95445 188 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 HIST1H1CP16403 213 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 AKR1C1Q04828 323 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 EBPQ15125 230 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 RPS19BP1Q86WX3 136 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 FUNDC1Q8IVP5 155 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 CD302Q8IX05 232 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 UMODL1-AS1Q8N2C9 162 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 TMEM86AQ8N2M4 240 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 OR5B17Q8NGF7 314 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 OR2T27Q8NH04 317 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 TESCQ96BS2 214 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 CFAP45Q9UL16 551 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 TIMM22Q9Y584 194 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 POLEQ07864 2286 aa0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 DIDO1Q9BTC0 2240 aaKnown RBP0.74□□□□□ -2.29
SMCHD1-207ENST00000581711 SETD5Q9C0A6 1442 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 STAB1Q9NY15 2570 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 ARFGEF3Q5TH69 2177 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 HEATR5AQ86XA9 2040 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 TMEM213A2RRL7 107 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 HCRTO43612 131 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 REG1AP05451 166 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 UGT2B7P16662 529 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 CXCR4P61073 352 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 SBSNQ6UWP8 590 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 FAM19A5Q7Z5A7 132 aaPredicted RBP0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 RPP25LQ8N5L8 163 aaKnown RBP0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 UBL4BQ8N7F7 174 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 SGMS2Q8NHU3 365 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 REG4Q9BYZ8 158 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 NDEL1Q9GZM8 345 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 CD300AQ9UGN4 299 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 PRELID1Q9Y255 219 aa0.73□□□□□ -2.29
SMCHD1-207ENST00000581711 NCOR2Q9Y618 2525 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 SMARCA4P51532 1647 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 NEMFO60524 1076 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 MSNP26038 577 aaKnown RBP0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 CD40LGP29965 261 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 HIST1H4AP62805 103 aaKnown RBP0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 SDHAF4Q5VUM1 108 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 HAVCR2Q8TDQ0 301 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 DNAJB3Q8WWF6 145 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 PACRGQ96M98 296 aaPredicted RBP0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 HES4Q9HCC6 221 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 ANAPC10Q9UM13 185 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 BRWD1Q9NSI6 2320 aa0.72□□□□□ -2.29
SMCHD1-207ENST00000581711 CCDC88AQ3V6T2 1871 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 ERICH2A1L162 156 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 FABP12A6NFH5 140 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 HSBP1L1C9JCN9 74 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 LEPROTO15243 131 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 BIRC5O15392 142 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 SSX8Q7RTT4 187 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 ZNF676Q8N7Q3 588 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 OR8D2Q9GZM6 311 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 WDR54Q9H977 334 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 TECTAO75443 2155 aa0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 TEP1Q99973 2627 aaKnown RBP0.71□□□□□ -2.3
SMCHD1-207ENST00000581711 KIF15Q9NS87 1388 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 ABCA2Q9BZC7 2435 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 GOLGA6L10A6NI86 522 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 HPGDSO60760 199 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 UBBP0CG47 229 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 HLA-DMBP28068 263 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 EVX1P49640 407 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 PPP1R1AQ13522 171 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 C1orf194Q5T5A4 169 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 DYNAPQ8N1N2 210 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 OR8B3Q8NGG8 313 aa0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 ERMAPQ96PL5 475 aaPredicted RBP0.7□□□□□ -2.3
SMCHD1-207ENST00000581711 DCUN1D5Q9BTE7 237 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 285.4 ms