RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 IGF1P05019 195 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TFAP2AP05549 437 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 CRYGBP07316 175 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 RAB3BP20337 219 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 MYL9P24844 172 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 SDC2P34741 201 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 HSPA13P48723 471 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 RAB9AP51151 201 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TPPP2P59282 170 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 GABARAPL2P60520 117 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 LSM3P62310 102 aaKnown RBP3.04□□□□□ -1.92
DDX42-211ENST00000580108 FHL3Q13643 280 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ARFRP1Q13795 201 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 FXYD3Q14802 87 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TRAM1Q15629 374 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 CDNFQ49AH0 187 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 LY6G6FQ5SQ64 297 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 UBE2UQ5VVX9 321 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 LIN54Q6MZP7 749 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 MZT2AQ6P582 158 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 CD200R1LQ6Q8B3 271 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ZNF554Q86TJ5 538 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 VKORC1L1Q8N0U8 176 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 COMMD1Q8N668 190 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 GVQW1Q8N7I0 195 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 MINDY2Q8NBR6 621 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 OR56B1Q8NGI3 324 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 OR5M8Q8NGP6 311 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 OR1N2Q8NGR9 330 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 C4orf3Q8WVX3 66 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 THRSPQ92748 146 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ZNF479Q96JC4 524 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 CABLES2Q9BTV7 478 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 CENPOQ9BU64 300 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ST6GALNAC5Q9BVH7 336 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TOLLIPQ9H0E2 274 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ZFP57Q9NU63 452 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 PIPOXQ9P0Z9 390 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 KIAA1456Q9P272 454 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 DAPK2Q9UIK4 370 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 ZNF221Q9UK13 617 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 HSF4Q9ULV5 492 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 RAB26Q9ULW5 256 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 FOXA2Q9Y261 457 aaPredicted RBP3.04□□□□□ -1.92
DDX42-211ENST00000580108 VSIG4Q9Y279 399 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 RRP15Q9Y3B9 282 aaKnown RBP3.04□□□□□ -1.92
DDX42-211ENST00000580108 LSM4Q9Y4Z0 139 aaKnown RBP3.04□□□□□ -1.92
DDX42-211ENST00000580108 NUBP2Q9Y5Y2 271 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 S4R3C0 116 aa3.04□□□□□ -1.92
DDX42-211ENST00000580108 TRBV6-7A0A0A0MS04 114 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 TRAV1-2A0A0B4J238 106 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 A0A1B0GW64 132 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 OR5H14A6NHG9 310 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 HMX3A6NHT5 357 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 E7EUB6 86 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ITGB1BP1O14713 200 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 PDCD5O14737 125 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 OVOL1O14753 267 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 FCGR3BO75015 233 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 SAP30O75446 220 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 CRYZL1O95825 349 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 IGHV3-23P01764 117 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 MBPP02686 304 aaPredicted RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 TRGV3P03979 118 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 LGALS1P09382 135 aaKnown RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 RPA2P15927 270 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 SPNP16150 400 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ZBTB25P24278 435 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 PSMA1P25786 263 aaKnown RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 CRIP2P52943 208 aaPredicted RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 BRWD1-AS2P59051 145 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ZNF616Q08AN1 781 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ACTBL2Q562R1 376 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 IDNKQ5T6J7 187 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ZNF660Q6AZW8 331 aaPredicted RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 FAM71F2Q6NXP2 309 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 SFXN4Q6P4A7 337 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ZNF773Q6PK81 442 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 H1FOOQ8IZA3 346 aaPredicted RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 OR8H1Q8NGG4 311 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 OR4A4PQ8NGN8 299 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 PTX4Q96A99 478 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 HARBI1Q96MB7 349 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 TSNAXQ99598 290 aaKnown RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 VCX3BQ9H321 246 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 RIMS4Q9H426 269 aaPredicted RBP3.03□□□□□ -1.92
DDX42-211ENST00000580108 RAB9BQ9NP90 201 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 ZNF355PQ9NSJ1 428 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 RHBDL2Q9NX52 303 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 BLOC1S6Q9UL45 172 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 SPATA2Q9UM82 520 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 STUB1Q9UNE7 303 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 LRRC42Q9Y546 428 aa3.03□□□□□ -1.92
DDX42-211ENST00000580108 HUWE1Q7Z6Z7 4374 aaKnown RBP3.02□□□□□ -1.93
DDX42-211ENST00000580108 DYNC2H1Q8NCM8 4307 aaKnown RBP3.02□□□□□ -1.93
DDX42-211ENST00000580108 TRAV18A0A075B6X5 111 aa3.02□□□□□ -1.93
DDX42-211ENST00000580108 TRAV3A0A0B4J244 114 aa3.02□□□□□ -1.93
DDX42-211ENST00000580108 IZUMO1RA6ND01 250 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms