RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	PTTG2	Q9NZH5	202 aa		18.6	■□□□□ 0.57
ERBB2-209	ENST00000578709	TCRBV4S1A1T	A0A5B7	111 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	CNIH1	O95406	144 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	GNB1	P62873	340 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	TMEM267	Q0VDI3	215 aa	Predicted RBP	18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	BAK1	Q16611	211 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	MMD2	Q8IY49	270 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	ABHD5	Q8WTS1	349 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	AKIP1	Q9NQ31	210 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	BET1L	Q9NYM9	111 aa		18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	TSSC4	Q9Y5U2	329 aa	Predicted RBP	18.59	■□□□□ 0.57
ERBB2-209	ENST00000578709	MGAM2	Q2M2H8	2515 aa		18.58	■□□□□ 0.57
ERBB2-209	ENST00000578709	ELANE	P08246	267 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	LPAR6	P43657	344 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	ECSCR	Q19T08	205 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	AKIRIN2	Q53H80	203 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	OR4A5	Q8NH83	315 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	GRPEL2	Q8TAA5	225 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	RTBDN	Q9BSG5	229 aa	Predicted RBP	18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	FAM103A1	Q9BTL3	118 aa	Known RBP	18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	GPR132	Q9UNW8	380 aa		18.58	■□□□□ 0.56
ERBB2-209	ENST00000578709	IGLV1-40	P01703	118 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	IL6R	P08887	468 aa	Predicted RBP	18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	PSMB8	P28062	276 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	OR4A47	Q6IF82	309 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	SSX9	Q7RTT3	188 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	CADM3	Q8N126	398 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	CCDC71L	Q8N9Z2	235 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	R3HDM4	Q96D70	268 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	C5orf66	Q9H5L9	145 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	COPZ2	Q9P299	210 aa		18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	C14orf166	Q9Y224	244 aa	Known RBP	18.57	■□□□□ 0.56
ERBB2-209	ENST00000578709	TNXA	Q16473	311 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	NSUN5P1	Q3KNT7	163 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	CXorf66	Q5JRM2	361 aa	Predicted RBP	18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	TRIQK	Q629K1	86 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	UNQ5815/PRO19632	Q6UWF5	114 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	LFNG	Q8NES3	379 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	ZFP57	Q9NU63	452 aa		18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	FOXA2	Q9Y261	457 aa	Predicted RBP	18.56	■□□□□ 0.56
ERBB2-209	ENST00000578709	MARCH11	A6NNE9	402 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709		H0Y980	276 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	ACTL6B	O94805	426 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	FGF2	P09038	288 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	MAS1L	P35410	378 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	ERVK-16	P61578	105 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	RPL23A	P62750	156 aa	Known RBP	18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	ZNF57	Q68EA5	555 aa	Predicted RBP	18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	SRSF12	Q8WXF0	261 aa	Known RBP	18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	TMEM68	Q96MH6	324 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	SCGB3A2	Q96PL1	93 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	TMEM140	Q9NV12	185 aa		18.55	■□□□□ 0.56
ERBB2-209	ENST00000578709	SOX15	O60248	233 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	B3GALNT1	O75752	331 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	TSPAN15	O95858	294 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	RPL8	P62917	257 aa	Known RBP	18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	DMBX1	Q8NFW5	382 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	MYOZ3	Q8TDC0	251 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	TP53RK	Q96S44	253 aa		18.54	■□□□□ 0.56
ERBB2-209	ENST00000578709	C3orf85	A0A1B0GTC6	90 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709		A0A1W2PN81	502 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709		A0A1W2PRX2	142 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	UPK2	O00526	184 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	IGKV1-39	P01597	117 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	IGKV1D-39	P04432	117 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	RPLP1	P05386	114 aa	Known RBP	18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	SERPINE2	P07093	398 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	IL7	P13232	177 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	RPA2	P15927	270 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	CHRNA7	P36544	502 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	INPP1	P49441	399 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	KHDC1L	Q5JSQ8	128 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	ASPHD1	Q5U4P2	390 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	LCNL1	Q6ZST4	164 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	OR5M8	Q8NGP6	311 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	S100Z	Q8WXG8	99 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	VSIG4	Q9Y279	399 aa		18.53	■□□□□ 0.56
ERBB2-209	ENST00000578709	MSGN1	A6NI15	193 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	KRAS	P01116	189 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	HLA-G	P17693	338 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	G6PC	P35575	357 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	C10orf55	Q5SWW7	151 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	SEC22A	Q96IW7	307 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	SPIN2A	Q99865	258 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	SPIN2B	Q9BPZ2	258 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	KLK15	Q9H2R5	256 aa		18.52	■□□□□ 0.56
ERBB2-209	ENST00000578709	TRAV3	A0A0B4J244	114 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	NAP1L6	A6NFF2	107 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	KIAA0141	Q14154	515 aa	Predicted RBP	18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	TMEM65	Q6PI78	240 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	OR4F17	Q8NGA8	305 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	OR4F4	Q96R69	305 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	NAA60	Q9H7X0	242 aa		18.51	■□□□□ 0.55
ERBB2-209	ENST00000578709	CRYM-AS1	A6NIL9	109 aa		18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	PF4V1	P10720	104 aa		18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	UCP1	P25874	307 aa		18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	SLC6A1	P30531	599 aa		18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	RPL27A	P46776	148 aa	Known RBP	18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	CDX1	P47902	265 aa	Predicted RBP	18.5	■□□□□ 0.55
ERBB2-209	ENST00000578709	RAB9A	P51151	201 aa		18.5	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms