RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 SSX9Q7RTT3 188 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 TMEM17Q86X19 198 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 VSTM2AQ8TAG5 236 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 GIMAP1Q8WWP7 306 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 USMG5Q96IX5 58 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 FYTTD1Q96QD9 318 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 OR2A7Q96R45 310 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
NPLOC4-213ENST00000573519 DPPA5A6NC42 116 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 HMX3A6NHT5 357 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 BRI3O95415 125 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 HRASP01112 189 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 TRBV12-3P01733 135 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 NAT1P18440 290 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 KIR2DS2P43631 304 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 HERV-K104P61576 105 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 RHOGP84095 191 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 RPEL1Q2QD12 228 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF343Q6P1L6 599 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 LYSMD2Q8IV50 215 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 SPAG16Q8N0X2 631 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 OR5H2Q8NGV7 314 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 GPX8Q8TED1 209 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 AP3S1Q92572 193 aa9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF2Q9BSG1 426 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-213ENST00000573519 FAM223BA6NKX1 122 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 SULT1C2O00338 296 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 HRH1P35367 487 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 ATP5G2Q06055 141 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 CATR1Q13166 79 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 EXOSC2Q13868 293 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 KLF5Q13887 457 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 TATDN3Q17R31 274 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 DHRS11Q6UWP2 260 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF818PQ6ZRF7 136 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 SLC25A42Q86VD7 318 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 FAM223AQ8IWN6 122 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 ZBTB34Q8NCN2 500 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 OR9G4Q8NGQ1 327 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 TMEM167AQ8TBQ9 72 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 HRASLSQ9HDD0 168 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 EXTL2Q9UBQ6 330 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 ADAM30Q9UKF2 790 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 U3KQK5 164 aa9.73□□□□□ -0.85
NPLOC4-213ENST00000573519 COL7A1Q02388 2944 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 CTDSP2O14595 271 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 OR2J3O76001 311 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 GNRHRP30968 328 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 RPL5P46777 297 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 TAS2R46P59540 309 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 ZNF45Q02386 682 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 MSMO1Q15800 293 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 AADACL3Q5VUY0 350 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 PUSL1Q8N0Z8 303 aaKnown RBP9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 OR51H1Q8NH63 302 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 WWC2-AS2Q96NR7 200 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 MIXL1Q9H2W2 232 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 SCPEP1Q9HB40 452 aa9.72□□□□□ -0.85
NPLOC4-213ENST00000573519 TEX22C9J3V5 150 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 IGLV1-51P01701 117 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 MYOD1P15172 320 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 MAS1LP35410 378 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 RPL8P62917 257 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 C15orf32Q32M92 178 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 OR4A47Q6IF82 309 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 NECAP1Q8NC96 275 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 RAB2BQ8WUD1 216 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 MOB3AQ96BX8 217 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 ABHD1Q96SE0 405 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 AIFM2Q9BRQ8 373 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 FXYD6Q9H0Q3 95 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 ZNF257Q9Y2Q1 563 aa9.71□□□□□ -0.86
NPLOC4-213ENST00000573519 DNAH9Q9NYC9 4486 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 TRBV9A0A0B4J1U6 114 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 E7EUB6 86 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 M0QYG6 137 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 RGS5O15539 181 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 HPRT1P00492 218 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 REG1AP05451 166 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 FRMD6-AS1P0C7T7 363 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 AREGP15514 252 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 RPA2P15927 270 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 HLA-GP17693 338 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 RCVRNP35243 200 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 TMBIM6P55061 237 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 TAS2R31P59538 309 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 TSPAN5P62079 268 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 LAX1Q8IWV1 398 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 DMBX1Q8NFW5 382 aa9.7□□□□□ -0.86
NPLOC4-213ENST00000573519 OR6F1Q8NGZ6 308 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms