RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MED6O75586 246 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 KBTBD11O94819 623 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 IGKV1D-33P01593 117 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 IGKV1-33P01594 117 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 PVALBP20472 110 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-209ENST00000573474 PAX6P26367 422 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 NUP62P37198 522 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-209ENST00000573474 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 EBI3Q14213 229 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 ZNF429Q86V71 674 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 THNSL2Q86YJ6 484 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 OR2T10Q8NGZ9 312 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 OR52E5Q8NH55 327 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 TMEM167AQ8TBQ9 72 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 DCUN1D4Q92564 292 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 QTRT1Q9BXR0 403 aaKnown RBP10.99□□□□□ -0.65
CCDC40-209ENST00000573474 MAGT1Q9H0U3 335 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 PRNDQ9UKY0 176 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 TNFSF18Q9UNG2 199 aa10.99□□□□□ -0.65
CCDC40-209ENST00000573474 FOXA2Q9Y261 457 aaPredicted RBP10.99□□□□□ -0.65
CCDC40-209ENST00000573474 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.99□□□□□ -0.654e-7■■■■□ 19.8
CCDC40-209ENST00000573474 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 L7N2F9 121 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 ARPC5O15511 151 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 SYNGR2O43760 224 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 CHST1O43916 411 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 SSSCA1O60232 199 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 NXPH3O95157 252 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 SNRNP70P08621 437 aaKnown RBP10.98□□□□□ -0.65
CCDC40-209ENST00000573474 FAM106CPP0CH98 169 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 OR2B8PP59922 312 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 SPCS3P61009 180 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 VAMP2P63027 116 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 PSG5Q15238 335 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 LGALSLQ3ZCW2 172 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-209ENST00000573474 LAMTOR1Q6IAA8 161 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 C9orf62Q8N4C0 152 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 INO80EQ8NBZ0 244 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-209ENST00000573474 EAF1Q96JC9 268 aaPredicted RBP10.98□□□□□ -0.65
CCDC40-209ENST00000573474 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 MFFQ9GZY8 342 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 RBKSQ9H477 322 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 FKBP11Q9NYL4 201 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 FAM96BQ9Y3D0 163 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 CCDC168Q8NDH2 2452 aa10.98□□□□□ -0.65
CCDC40-209ENST00000573474 A0A0U1RQK1 487 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 SLC25A17O43808 307 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 SPDEFO95238 335 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 IFNA17P01571 189 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 CRYGBP07316 175 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 FGF2P09038 288 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 P2RY1P47900 373 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 DYNLT3P51808 116 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 HES1Q14469 280 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 PDLIM3Q53GG5 364 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-209ENST00000573474 ACOT7LQ6ZUV0 252 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 NPBQ8NG41 125 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 NANPQ8TBE9 248 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 NUP50Q9UKX7 468 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 HSPB11Q9Y547 144 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 OR51B2Q9Y5P1 312 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 CREBBPQ92793 2442 aa10.97□□□□□ -0.65
CCDC40-209ENST00000573474 A0A0D9SG52 128 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 CEBPZOSA8MTT3 80 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 GPR137BO60478 399 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 OR2F2O95006 317 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 LY86O95711 162 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 FSHBP01225 129 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 FBP1P09467 338 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 CXCL2P19875 107 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 C4BPBP20851 252 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 CD24P25063 80 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 CNTFRP26992 372 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 TAS2R30P59541 319 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 HSPE1P61604 102 aaKnown RBP10.96□□□□□ -0.65
CCDC40-209ENST00000573474 RPL23AP62750 156 aaKnown RBP10.96□□□□□ -0.65
CCDC40-209ENST00000573474 RPL8P62917 257 aaKnown RBP10.96□□□□□ -0.65
CCDC40-209ENST00000573474 OR2F1Q13607 317 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 HNF4GQ14541 408 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 FAM120AOSQ5T036 256 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 TEX29Q8N6K0 151 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 Q8N6K4 173 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 SMIM8Q96KF7 97 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 KIAA1456Q9P272 454 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 METTL1Q9UBP6 276 aaKnown RBP10.96□□□□□ -0.65
CCDC40-209ENST00000573474 ZNF257Q9Y2Q1 563 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 SIGLEC9Q9Y336 463 aa10.96□□□□□ -0.65
CCDC40-209ENST00000573474 ITPR3Q14573 2671 aa10.96□□□□□ -0.66
CCDC40-209ENST00000573474 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 RRHO14718 337 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 NBR2O15453 112 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 KCNAB3O43448 404 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 CD5LO43866 347 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 NDUFA3O95167 84 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 IAPPP10997 89 aa10.95□□□□□ -0.66
CCDC40-209ENST00000573474 TMEM11P17152 192 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms