RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 M0R233 179 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 CDX4O14627 284 aaPredicted RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 ADRA2AP08913 450 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 FKBP2P26885 142 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 IL2RGP31785 369 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ATP5G3P48201 142 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 NDUFA6P56556 154 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 RPL24P83731 157 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 CRHR2Q13324 411 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 MMDQ15546 238 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 CCL15Q16663 113 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 TMEM244Q5VVB8 128 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ZNF793Q6ZN11 406 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 Q6ZN92 141 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ZNF440Q8IYI8 595 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 FRZBQ92765 325 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 SLAMF6Q96DU3 332 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 ERMAPQ96PL5 475 aaPredicted RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 METTL26Q96S19 204 aa3.81□□□□□ -1.8
SMG1-207ENST00000563235 TRMT112Q9UI30 125 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 RPUSD1Q9UJJ7 312 aaKnown RBP3.81□□□□□ -1.8
SMG1-207ENST00000563235 POLR2AP24928 1970 aaKnown RBP3.8□□□□□ -1.8
SMG1-207ENST00000563235 LINC00473A8K010 186 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 H0YJW9 148 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 LYRM1O43325 122 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 SLC35G6P0C7Q6 338 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ATP6V0CP27449 155 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 RPL34P49207 117 aaKnown RBP3.8□□□□□ -1.8
SMG1-207ENST00000563235 ZNF83P51522 516 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ZNF260Q3ZCT1 412 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 LY6G5BQ8NDX9 201 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 PLPP5Q8NEB5 264 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 CT55Q8WUE5 264 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 MALSU1Q96EH3 234 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 C1QTNF6Q9BXI9 259 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 IFI27L2Q9H2X8 130 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 EHFQ9NZC4 300 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 C11orf21Q9P2W6 132 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 FER1L5A0AVI2 2057 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 TTC28Q96AY4 2481 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 TRAV8-2A0A0B4J237 113 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ZNF670-ZNF695F2Z2N8 137 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 J3QQQ9 107 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 OR12D1P0DN82 309 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 PFN2P35080 140 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 NOVP48745 357 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 THBS3P49746 956 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ARFRP1Q13795 201 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 CENPWQ5EE01 88 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 MEIG1Q5JSS6 88 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 MOB1BQ7L9L4 216 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ATP5L2Q7Z4Y8 100 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 TMEM179BQ7Z7N9 219 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 C20orf196Q8IYI0 205 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 RFESDQ8TAC1 157 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 MOB1AQ9H8S9 216 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 PDFQ9HBH1 243 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 CA10Q9NS85 328 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 MTFP1Q9UDX5 166 aa3.8□□□□□ -1.8
SMG1-207ENST00000563235 LTBP2Q14767 1821 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 A0A0G2JMM0 328 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 TEX50A0A1B0GTY4 177 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 A0A1W2PPB8 328 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 KIR3DP1A8MWS1 328 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 RPL36A-HNRNPH2H7BZ11 118 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 XKRYO14609 159 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 PDCD6O75340 191 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 HLA-DRB3P79483 266 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 CATR1Q13166 79 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SRSF9Q13242 221 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMG1-207ENST00000563235 TRNP1Q6NT89 227 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 Q6ZSV7 163 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 C11orf53Q8IXP5 236 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SVBPQ8N300 66 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 LRRC29Q8WV35 223 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SLC25A46Q96AG3 418 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SDF2Q99470 211 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 GABARAPL3Q9BY60 117 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 MED28Q9H204 178 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 R3HDMLQ9H3Y0 253 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 C7orf71A4D174 169 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 KNCNA6PVL3 124 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 A8MT66 165 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 OVOL1O14753 267 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
SMG1-207ENST00000563235 SCRG1O75711 98 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 HLA-DQB2P05538 268 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 ZNF19P17023 458 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 CD70P32970 193 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 DEFA5Q01523 94 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 PDGFRLQ15198 375 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 TTC32Q5I0X7 151 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 LYRM7Q5U5X0 104 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 ZNF705AQ6ZN79 300 aaPredicted RBP3.79□□□□□ -1.8
SMG1-207ENST00000563235 Q6ZRM9 215 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 ZNF695Q8IW36 515 aa3.79□□□□□ -1.8
SMG1-207ENST00000563235 SAXO1Q8IYX7 474 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms