RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
COMMD4-206ENST00000562610 OR8U8P0C7N1 319 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-206ENST00000562610 RUNX1Q01196 453 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 DEFA5Q01523 94 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
COMMD4-206ENST00000562610 PUSL1Q8N0Z8 303 aaKnown RBP12.51□□□□□ -0.41
COMMD4-206ENST00000562610 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 FCAMRQ8WWV6 532 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 ABHD1Q96SE0 405 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
COMMD4-206ENST00000562610 C13orf42A0A1B0GVH6 325 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 TPPPO94811 219 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 HPRT1P00492 218 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 IFNA6P05013 189 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 TAS2R31P59538 309 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 DGCR2P98153 550 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 IL18Q14116 193 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 PHLDA2Q53GA4 152 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 VAX1Q5SQQ9 334 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 REC114Q7Z4M0 266 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 SPIN2AQ99865 258 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 SPIN2BQ9BPZ2 258 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 AURKAIP1Q9NWT8 199 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-206ENST00000562610 MTFP1Q9UDX5 166 aa12.5□□□□□ -0.41
COMMD4-206ENST00000562610 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
COMMD4-206ENST00000562610 IGHV4OR15-8A0A075B7B6 117 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 A0A087WW49 117 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 LINC01619G3V211 115 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 S1PR2O95136 353 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 CD3DP04234 171 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 OR9G9P0C7N8 305 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 NQO2P16083 231 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 S100GP29377 79 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
COMMD4-206ENST00000562610 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 MCFD2Q8NI22 146 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 CD300LFQ8TDQ1 290 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 FYTTD1Q96QD9 318 aaKnown RBP12.49□□□□□ -0.41
COMMD4-206ENST00000562610 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
COMMD4-206ENST00000562610 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 CEPT1Q9Y6K0 416 aa12.49□□□□□ -0.41
COMMD4-206ENST00000562610 A0A0G2JLM5 398 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 PGLYRP1O75594 196 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-206ENST00000562610 RPA2P15927 270 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 MAS1LP35410 378 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 SLURP1P55000 103 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 TAS2R19P59542 299 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 ERVK-16P61578 105 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 RPL8P62917 257 aaKnown RBP12.48□□□□□ -0.41
COMMD4-206ENST00000562610 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
COMMD4-206ENST00000562610 SLC38A6Q8IZM9 456 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 ADAD2Q8NCV1 583 aaKnown RBP12.48□□□□□ -0.41
COMMD4-206ENST00000562610 OR4A5Q8NH83 315 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 SLIRPQ9GZT3 109 aaKnown RBP12.48□□□□□ -0.41
COMMD4-206ENST00000562610 PLEKHA2Q9HB19 425 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
COMMD4-206ENST00000562610 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 HMX3A6NHT5 357 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 PGAM2P15259 253 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 HLA-GP17693 338 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 TBPP20226 339 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 F2RP25116 425 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 PPP5CP53041 499 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 ARRDC1Q8N5I2 433 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 SMIM4Q8WVI0 70 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 DGCR14Q96DF8 476 aaKnown RBP12.47□□□□□ -0.41
COMMD4-206ENST00000562610 RSRP1Q9BUV0 290 aa12.47□□□□□ -0.41
COMMD4-206ENST00000562610 ANKRD34BA5PLL1 514 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 PRH1P02810 166 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 MYOD1P15172 320 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 LPAR6P43657 344 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 KRTAP10-11P60412 298 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 SCGB2B2Q4G0G5 96 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 TBC1D26Q86UD7 250 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 SLC25A42Q86VD7 318 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 TMEM229BQ8NBD8 167 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 OR4D10Q8NGI6 311 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 DCUN1D4Q92564 292 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 RABL2AQ9UBK7 228 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-206ENST00000562610 RABL2BQ9UNT1 228 aa12.46□□□□□ -0.41
COMMD4-206ENST00000562610 TRAV3A0A0B4J244 114 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 E7EUB6 86 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 OVOL1O14753 267 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 BRI3O95415 125 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 RAB3DO95716 219 aa12.45□□□□□ -0.42
COMMD4-206ENST00000562610 HSPB1P04792 205 aaKnown RBP12.45□□□□□ -0.42
COMMD4-206ENST00000562610 ZNF735P0CB33 412 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms