RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MALSU1Q96EH3 234 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 IGHV4-59P01825 116 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 FBP1P09467 338 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 PSMB6P28072 239 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 SSX2Q16385 188 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 Q5BKY6 102 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 RBMS3Q6XE24 437 aaKnown RBP18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 OR4D5Q8NGN0 318 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 RHOVQ96L33 236 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 HYLS1Q96M11 299 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 ZFP57Q9NU63 452 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 COA4Q9NYJ1 87 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 CACNG5Q9UF02 275 aa18.01■□□□□ 0.47
SYNGR3-202ENST00000562045 SHOXO15266 292 aa18■□□□□ 0.47
SYNGR3-202ENST00000562045 IER3P46695 156 aa18■□□□□ 0.47
SYNGR3-202ENST00000562045 EIF2B2P49770 351 aaKnown RBP18■□□□□ 0.47
SYNGR3-202ENST00000562045 ARHGDIBP52566 201 aa18■□□□□ 0.47
SYNGR3-202ENST00000562045 POU2AF1Q16633 256 aa18■□□□□ 0.47
SYNGR3-202ENST00000562045 HARBI1Q96MB7 349 aa18■□□□□ 0.47
SYNGR3-202ENST00000562045 IGHV3-72A0A0B4J1Y9 119 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 FAM90A9PA6NNJ1 464 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 TIMM23O14925 209 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 MPC2O95563 127 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 PET100P0DJ07 73 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 RAB32Q13637 225 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 HABP2Q14520 560 aaPredicted RBP17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 IZUMO4Q1ZYL8 232 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 Q6ZRM9 215 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 SSX9Q7RTT3 188 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 OR1S1Q8NH92 325 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 MEGF9Q9H1U4 602 aa17.99■□□□□ 0.47
SYNGR3-202ENST00000562045 PITX3O75364 302 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 SCGB1D2O95969 90 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 VKORC1L1Q8N0U8 176 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 TAF15Q92804 592 aaKnown RBP eCLIP17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 TMEM140Q9NV12 185 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 TRAV14DV4A0A0A6YYC5 116 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 CD1BP29016 333 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 NKX2-1P43699 371 aaPredicted RBP17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 S100A10P60903 97 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 RPS16P62249 146 aaKnown RBP17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 UBA52P62987 128 aaKnown RBP17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 C11orf87Q6NUJ2 197 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 THAP6Q8TBB0 222 aa17.98■□□□□ 0.47
SYNGR3-202ENST00000562045 KRTAP24-1Q3LI83 254 aa17.97■□□□□ 0.47
SYNGR3-202ENST00000562045 OR4A47Q6IF82 309 aa17.97■□□□□ 0.47
SYNGR3-202ENST00000562045 PIFOQ8TCI5 191 aa17.97■□□□□ 0.47
SYNGR3-202ENST00000562045 CFHR4Q92496 578 aa17.97■□□□□ 0.47
SYNGR3-202ENST00000562045 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.97■□□□□ 0.47
SYNGR3-202ENST00000562045 ST8SIA3O43173 380 aa17.96■□□□□ 0.47
SYNGR3-202ENST00000562045 MBPP02686 304 aaPredicted RBP17.96■□□□□ 0.47
SYNGR3-202ENST00000562045 LGALS7P47929 136 aa17.96■□□□□ 0.47
SYNGR3-202ENST00000562045 OR11H4Q8NGC9 324 aa17.96■□□□□ 0.47
SYNGR3-202ENST00000562045 SSX3Q99909 188 aa17.96■□□□□ 0.47
SYNGR3-202ENST00000562045 SRRM4A7MD48 611 aaKnown RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 RBMXL2O75526 392 aaKnown RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 RLN2P04090 185 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 FBLN7Q53RD9 439 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 RBMXL1Q96E39 390 aaKnown RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 RNF5Q99942 180 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 POMT1Q9Y6A1 747 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 H3BUX3 64 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 OR9G9P0C7N8 305 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 SAA1P0DJI8 122 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 SLC25A4P12235 298 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 NKX2-5P52952 324 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 ID3Q02535 119 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 CXorf66Q5JRM2 361 aaPredicted RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 PRSS54Q6PEW0 395 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 FOXRED2Q8IWF2 684 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 VSTM2AQ8TAG5 236 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 SSMEM1Q8WWF3 244 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 BET1LQ9NYM9 111 aa17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 LSM5Q9Y4Y9 91 aaKnown RBP17.95■□□□□ 0.46
SYNGR3-202ENST00000562045 FXYD6-FXYD2A0A087WZ82 144 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 FAM90A26D6RGX4 464 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 K7EPK0 472 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 FAM71E2Q8N5Q1 922 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 OR4A16Q8NH70 328 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 JMJD8Q96S16 334 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 MBD2Q9UBB5 411 aa17.94■□□□□ 0.46
SYNGR3-202ENST00000562045 DEDDO75618 318 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 SNAPC5O75971 98 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 CD24P25063 80 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 BRS3P32247 399 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 LRRC75BQ2VPJ9 315 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 VMA21Q3ZAQ7 101 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 PUSL1Q8N0Z8 303 aaKnown RBP17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 TSNAXQ99598 290 aaKnown RBP17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 CACFD1Q9UGQ2 172 aa17.93■□□□□ 0.46
SYNGR3-202ENST00000562045 HMSDA8MTL9 139 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 H0YIZ8 118 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 CLDN34H7C241 214 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 WRBO00258 174 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 IGKV1D-33P01593 117 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 IGKV1-33P01594 117 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 IGLV2-23P01705 113 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 IL6RP08887 468 aaPredicted RBP17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 UBE2KP61086 200 aa17.92■□□□□ 0.46
SYNGR3-202ENST00000562045 RELBQ01201 579 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms