RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
SMAD3-208ENST00000558827 DPPA5A6NC42 116 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 KBTBD11O94819 623 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 HLA-AP01891 365 aaKnown RBP9.58□□□□□ -0.88
SMAD3-208ENST00000558827 SMIM18P0DKX4 95 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 GP9P14770 177 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 AREGP15514 252 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 PRSS3P35030 304 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 CBX5P45973 191 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 INSL3P51460 131 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 ATP5G2Q06055 141 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 EXOSC2Q13868 293 aaKnown RBP9.58□□□□□ -0.88
SMAD3-208ENST00000558827 AADACL3Q5VUY0 350 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 PUSL1Q8N0Z8 303 aaKnown RBP9.58□□□□□ -0.88
SMAD3-208ENST00000558827 OR5H2Q8NGV7 314 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 TMEM167AQ8TBQ9 72 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 SLC25A46Q96AG3 418 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 TMEM68Q96MH6 324 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
SMAD3-208ENST00000558827 TEX22C9J3V5 150 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 PPP5D1E7EU14 171 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 S1PR2O95136 353 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 NDUFB8O95169 186 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 HRASP01112 189 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 ELK1P19419 428 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 ZP3P21754 424 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 GNRHRP30968 328 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
SMAD3-208ENST00000558827 RPEL1Q2QD12 228 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 GPR107Q5VW38 600 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 ZNF343Q6P1L6 599 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 ANKRD13BQ86YJ7 626 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 LYSMD2Q8IV50 215 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 OR6Q1Q8NGQ2 317 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 GIMAP1Q8WWP7 306 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 SPIN2AQ99865 258 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 SPIN2BQ9BPZ2 258 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 FBXL7Q9UJT9 491 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
SMAD3-208ENST00000558827 FAM25AB3EWG3 89 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 FAM25CB3EWG5 89 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 FAM25GB3EWG6 89 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 EDN2P20800 178 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 HRH1P35367 487 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 PHLDA2Q53GA4 152 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 IL34Q6ZMJ4 242 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 USMG5Q96IX5 58 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 FXYD6Q9H0Q3 95 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 ZC4H2Q9NQZ6 224 aa9.56□□□□□ -0.88
SMAD3-208ENST00000558827 HUWE1Q7Z6Z7 4374 aaKnown RBP9.55□□□□□ -0.88
SMAD3-208ENST00000558827 SMIM31A0A1B0GVY4 71 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 IZUMO1RA6ND01 250 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 CGB1A6NKQ9 187 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 BMPR1BO00238 502 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 CREBL2O60519 120 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-208ENST00000558827 PGLYRP1O75594 196 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-208ENST00000558827 RLN1P04808 185 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 HLA-GP17693 338 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 LPAR6P43657 344 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 RPL8P62917 257 aaKnown RBP9.55□□□□□ -0.88
SMAD3-208ENST00000558827 CATR1Q13166 79 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 DCTN2Q13561 401 aaKnown RBP9.55□□□□□ -0.88
SMAD3-208ENST00000558827 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 SBSPONQ8IVN8 264 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 DMBX1Q8NFW5 382 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 VSTM2AQ8TAG5 236 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 HINT2Q9BX68 163 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 ANAPC10Q9UM13 185 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 NSG2Q9Y328 171 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 U3KQK5 164 aa9.55□□□□□ -0.88
SMAD3-208ENST00000558827 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 M0QYG6 137 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 UPK2O00526 184 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 TMEM127O75204 238 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 OR2C1O95371 312 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 APOA1P02647 267 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 CSN3P07498 182 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 ZNF735P0CB33 412 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 NAT1P18440 290 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 PSMB6P28072 239 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 RORCP51449 518 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 TSPAN5P62079 268 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 DHRS11Q6UWP2 260 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 CLEC19AQ6UXS0 136 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 OR10W1Q8NGF6 305 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 OR6F1Q8NGZ6 308 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 GPX8Q8TED1 209 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 MOB3AQ96BX8 217 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
SMAD3-208ENST00000558827 FANCD2OSQ96PS1 177 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 SLC2A9Q9NRM0 540 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 TENM3Q9P273 2699 aa9.54□□□□□ -0.88
SMAD3-208ENST00000558827 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms