RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CD177Q8N6Q3 437 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 FAM216BQ8N7L0 139 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 HSD17B11Q8NBQ5 300 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 PPP1R35Q8TAP8 253 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 FAM213BQ8TBF2 198 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
TPM1-212ENST00000558347 MALSU1Q96EH3 234 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 SNX22Q96L94 193 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 TBX15Q96SF7 602 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 SH3BGRL3Q9H299 93 aa8.4□□□□□ -1.06
TPM1-212ENST00000558347 IGKV1D-13A0A0B4J2D9 117 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 SSSCA1O60232 199 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 TOX4O94842 621 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 IGKV1-13P0DP09 117 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 SELLP14151 372 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 OR3A1P47881 315 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RAB2AP61019 212 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RUSC1-AS1Q66K80 236 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ZNF497Q6ZNH5 498 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ZNF561Q8N587 486 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 OR2G3Q8NGZ4 309 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 OR10J5Q8NHC4 309 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 TAF15Q92804 592 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPM1-212ENST00000558347 HIST1H2BAQ96A08 127 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RAB40CQ96S21 281 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ATP5SQ99766 215 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 FAM234AQ9H0X4 552 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 SIRPDQ9H106 197 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 NCOR1P1Q9H4R4 102 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RPS10P5Q9NQ39 176 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 COA4Q9NYJ1 87 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 KIAA1456Q9P272 454 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 TRAV1-1A0A0B4J248 108 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 CENPVL3A0A0U1RRI6 287 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ZNF98A6NK75 572 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 WRBO00258 174 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 HSPB6O14558 160 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 HSD17B6O14756 317 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 MGST3O14880 152 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 LIPFP07098 398 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RNASE1P07998 156 aaKnown RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 DYNLT3P51808 116 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 ARF6P62330 175 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RPL23AP62750 156 aaKnown RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 S100A12P80511 92 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 DEFB112Q30KQ8 113 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 CXorf66Q5JRM2 361 aaPredicted RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 SLC35E4Q6ICL7 350 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 OR10V1Q8NGI7 309 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 RBMXL1Q96E39 390 aaKnown RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 GAFA1Q96PS6 74 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 CLCC1Q96S66 551 aa8.39□□□□□ -1.07
TPM1-212ENST00000558347 MBNL3Q9NUK0 354 aaKnown RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 RPUSD1Q9UJJ7 312 aaKnown RBP8.39□□□□□ -1.07
TPM1-212ENST00000558347 TMEM30CPA0ZSE6 113 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 NKX6-3A6NJ46 265 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 PPP1CCP36873 323 aaKnown RBP8.38□□□□□ -1.07
TPM1-212ENST00000558347 GABRA2P47869 451 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 TAS2R30P59541 319 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 HABP2Q14520 560 aaPredicted RBP8.38□□□□□ -1.07
TPM1-212ENST00000558347 SPSB3Q6PJ21 355 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 STX12Q86Y82 276 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 LY6G5BQ8NDX9 201 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 OR10G4Q8NGN3 311 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 SFT2D1Q8WV19 159 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 COQ2Q96H96 371 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
TPM1-212ENST00000558347 PARP12Q9H0J9 701 aaKnown RBP8.38□□□□□ -1.07
TPM1-212ENST00000558347 PRDM13Q9H4Q3 707 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 RNF150Q9ULK6 438 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 WSB1Q9Y6I7 421 aa8.38□□□□□ -1.07
TPM1-212ENST00000558347 A0A087WWC5 75 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 CLDN34H7C241 214 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 M0R036 132 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 HOXA3O43365 443 aaPredicted RBP8.37□□□□□ -1.07
TPM1-212ENST00000558347 TXNL1O43396 289 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 NDUFB3O43676 98 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 CHST1O43916 411 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 IFNA5P01569 189 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
TPM1-212ENST00000558347 S100A8P05109 93 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 SERPINE2P07093 398 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 SNRNP70P08621 437 aaKnown RBP8.37□□□□□ -1.07
TPM1-212ENST00000558347 FHITP49789 147 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 SULT1A1P50225 295 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 AKR1D1P51857 326 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 PAX9P55771 341 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 MSMO1Q15800 293 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 SOHLH1Q5JUK2 328 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 ZNF506Q5JVG8 444 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
TPM1-212ENST00000558347 ODF3L1Q8IXM7 274 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms