RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CDC26Q8NHZ8 85 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 PHOSPHO2Q8TCD6 241 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 GPR119Q8TDV5 335 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 KLK6Q92876 244 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 NMNAT3Q96T66 252 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 MND1Q9BWT6 205 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 MRPL16Q9NX20 251 aaKnown RBP1.75□□□□□ -2.13
SCFD1-221ENST00000556534 TAAR3PQ9P1P4 343 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 PKIGQ9Y2B9 76 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 MINOS1-NBL1R4GNA1 71 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 IFT140Q96RY7 1462 aa1.75□□□□□ -2.13
SCFD1-221ENST00000556534 DCCP43146 1447 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 HECW1Q76N89 1606 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 IGHV1-69-2A0A0G2JMI3 117 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 E7EQL1 145 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 C3orf84H3BNL1 204 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 TP53I11O14683 189 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 UBE2L6O14933 153 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 PLA2G10O15496 165 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 CTSGP08311 255 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 FAM228BP0C875 321 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 LPAR6P43657 344 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 CAPZBP47756 277 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 RBM11P57052 281 aaKnown RBP1.74□□□□□ -2.13
SCFD1-221ENST00000556534 FKBP1AP62942 108 aaKnown RBP1.74□□□□□ -2.13
SCFD1-221ENST00000556534 FOXF1Q12946 379 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 ACOT6Q3I5F7 207 aaPredicted RBP1.74□□□□□ -2.13
SCFD1-221ENST00000556534 CCDC121Q6ZUS5 278 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 SLC22A24Q8N4F4 322 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 CNEP1R1Q8N9A8 125 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 OR5C1Q8NGR4 320 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 C12orf43Q96C57 262 aaKnown RBP1.74□□□□□ -2.13
SCFD1-221ENST00000556534 PPP1R2P1Q96PQ5 205 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 TTTY13Q9BZ97 58 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 TLNRD1Q9H1K6 362 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 URB2Q14146 1524 aaKnown RBP1.74□□□□□ -2.13
SCFD1-221ENST00000556534 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 STRCQ7RTU9 1775 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 CCDC144AA2RUR9 1427 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 ADGRL3Q9HAR2 1447 aa1.74□□□□□ -2.13
SCFD1-221ENST00000556534 LRP5O75197 1615 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 SMARCA4P51532 1647 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 MTUS2Q5JR59 1369 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 A0A087WUJ7 227 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 IGHV3-15A0A0B4J1V0 119 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 G3V3Q6 166 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 BHLHE40O14503 412 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 NDUFB2O95178 105 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 IGHV1-69P01742 117 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 CD79AP11912 226 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 CPMP14384 443 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 HIST1H1TP22492 207 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-221ENST00000556534 GABRA2P47869 451 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 RWDD2BP57060 319 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 OR4D2P58180 307 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 RUNX1Q01196 453 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 FABP9Q0Z7S8 132 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 CLDND2Q8NHS1 167 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 DGCR14Q96DF8 476 aaKnown RBP1.73□□□□□ -2.13
SCFD1-221ENST00000556534 ERMAPQ96PL5 475 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-221ENST00000556534 PAIP2Q9BPZ3 127 aaKnown RBP1.73□□□□□ -2.13
SCFD1-221ENST00000556534 AICDAQ9GZX7 198 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 GPR84Q9NQS5 396 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 MCTS1Q9ULC4 181 aaKnown RBP1.73□□□□□ -2.13
SCFD1-221ENST00000556534 PRELID1Q9Y255 219 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 EP400Q96L91 3159 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 CAMSAP1Q5T5Y3 1602 aa1.73□□□□□ -2.13
SCFD1-221ENST00000556534 SYNJ1O43426 1573 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 GREB1Q4ZG55 1949 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 ADAMTS7Q9UKP4 1686 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 GRIFINA4D1Z8 144 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 SDHAF1A6NFY7 115 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 ODF3BA8MYP8 253 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 CD200P41217 278 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 XCL1P47992 114 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 GUK1Q16774 197 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-221ENST00000556534 LPCAT3Q6P1A2 487 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 OR5B17Q8NGF7 314 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 CNBD2Q96M20 576 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 OR52E6Q96RD3 313 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 CCDC94Q9BW85 323 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-221ENST00000556534 MRPL27Q9P0M9 148 aaKnown RBP1.72□□□□□ -2.13
SCFD1-221ENST00000556534 ANGPT4Q9Y264 503 aa1.72□□□□□ -2.13
SCFD1-221ENST00000556534 PPRC1Q5VV67 1664 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 CUL9Q8IWT3 2517 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 FANCD2Q9BXW9 1451 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 A0A0J9YX75 114 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 PQLC2LA1A4F0 135 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 UBFD1O14562 309 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 ZNF189O75820 626 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 CNIH1O95406 144 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 NSA2O95478 260 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 HAND1O96004 215 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 GZMBP10144 247 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 RPL27AP46776 148 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 RPL5P46777 297 aaKnown RBP1.71□□□□□ -2.14
SCFD1-221ENST00000556534 GABRA4P48169 554 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 TAS2R30P59541 319 aa1.71□□□□□ -2.14
SCFD1-221ENST00000556534 BASP1P80723 227 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms