RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 IFNA4P05014 189 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 ERVFRD-1P60508 538 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 TBR1Q16650 682 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 ABHD12Q8N2K0 398 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 Q8WTZ3 238 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 GATAD1Q8WUU5 269 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 ACTR3CQ9C0K3 210 aaPredicted RBP15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 SDF2L1Q9HCN8 221 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 TCF19Q9Y242 345 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 URGCP-MRPS24S4R325 110 aa15.23■□□□□ 0.03
PRPF40B-208ENST00000548436 PRSS46E5RG02 174 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 C17orf112F2Z3M2 114 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 TMPRSS2O15393 492 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 LY86O95711 162 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 CXCL1P09341 107 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 THBS3P49746 956 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 MEF2BQ02080 365 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 WDR25Q64LD2 544 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 RHOVQ96L33 236 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 SIRT7Q9NRC8 400 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 ADGRG4Q8IZF6 3080 aa15.22■□□□□ 0.03
PRPF40B-208ENST00000548436 C15orf61A6NNL5 157 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 B4DEV8 164 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 S100A6P06703 90 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 TNFRSF1AP19438 455 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 RPP30P78346 268 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 OR4A47Q6IF82 309 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 ZCCHC14Q8WYQ9 949 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 ZNRD1Q9P1U0 126 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 CXorf65A6NEN9 183 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 NDUFB7P17568 137 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 PNRC1Q12796 327 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 GCSAMLQ5JQS6 135 aa15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 RPUSD1Q9UJJ7 312 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-208ENST00000548436 SMCO3A2RU48 225 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 ZNF98A6NK75 572 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 FCN3O75636 299 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 TREML4Q6UXN2 200 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 C1QL4Q86Z23 238 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 DIRC2Q96SL1 478 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 TRGV8A0A0C4DH27 118 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 UBE2CO00762 179 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 RPS10P46783 165 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 PSMB3P49720 205 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 ACOT6Q3I5F7 207 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 SLC25A48Q6ZT89 311 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 SCNM1Q9BWG6 230 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM14BQ9NUH8 114 aa15.2■□□□□ 0.02
PRPF40B-208ENST00000548436 TGIF2-C20orf24A0A0A6YYL0 155 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 hADV38S2A0JD32 116 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 CYB5BO43169 146 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 IGHV2-5P01817 119 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 ADTRPQ96IZ2 230 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 MS4A5Q9H3V2 200 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 FOXA2Q9Y261 457 aaPredicted RBP15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 LINC00312Q9Y6C7 94 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 KALRNO60229 2985 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 TNCP24821 2201 aa15.19■□□□□ 0.02
PRPF40B-208ENST00000548436 CT45A6P0DMU7 189 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 CT45A5P0DMU8 189 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 CT45A7P0DMV0 189 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 MYOD1P15172 320 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 CDC34P49427 236 aaPredicted RBP15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 TMPRSS3P57727 454 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 WFIKKN1Q96NZ8 548 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 C12orf57Q99622 126 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 GGACTQ9BVM4 153 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 SLC25A10Q9UBX3 287 aaPredicted RBP15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 TRAV38-1A0A0B4J264 116 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 NKX6-3A6NJ46 265 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 K7ENP7 123 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 HSPE1P61604 102 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 MGST2Q99735 147 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 SMIM7Q9BQ49 75 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 SAP30LQ9HAJ7 183 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 MANBALQ9NQG1 85 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 PKDREJQ9NTG1 2253 aa15.18■□□□□ 0.02
PRPF40B-208ENST00000548436 SEC14L6B5MCN3 397 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 YIF1AO95070 293 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 POU2AF1Q16633 256 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 ZNF674Q2M3X9 581 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 C1orf159Q96HA4 380 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 POLEQ07864 2286 aa15.17■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM178BH3BS89 294 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 PAGE4O60829 102 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 MPDU1O75352 247 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 IGKV1-16P04430 117 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 RPL31P62899 125 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM30BQ3MIR4 351 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 OR4F5Q8NH21 305 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 RPUSD4Q96CM3 377 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 OR4F4Q96R69 305 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM242Q9NWH2 141 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 METTL1Q9UBP6 276 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 SRRM4A7MD48 611 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 TMEM250H0YL14 139 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 KBTBD11O94819 623 aa15.16■□□□□ 0.02
PRPF40B-208ENST00000548436 HRASP01112 189 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms