RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 COA4Q9NYJ1 87 aa9.18□□□□□ -0.94
RAB5C-204ENST00000547517 H3BUA1 57 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 GPR31O00270 319 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 RBFOX2O43251 390 aaKnown RBP eCLIP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 PGLYRP1O75594 196 aaPredicted RBP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 TPPPO94811 219 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 S1PR2O95136 353 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 CD3DP04234 171 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 LGALS1P09382 135 aaKnown RBP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 RUNX1Q01196 453 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 ZNF616Q08AN1 781 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 IL18Q14116 193 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 CMTM1Q8IZ96 169 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 PUSL1Q8N0Z8 303 aaKnown RBP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 OR1N2Q8NGR9 330 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 DGCR14Q96DF8 476 aaKnown RBP9.17□□□□□ -0.94
RAB5C-204ENST00000547517 DIRAS2Q96HU8 199 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 TMEM68Q96MH6 324 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 HRASLSQ9HDD0 168 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 PTTG2Q9NZH5 202 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 MTFP1Q9UDX5 166 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 NOTCH3Q9UM47 2321 aa9.17□□□□□ -0.94
RAB5C-204ENST00000547517 PRKDCP78527 4128 aaKnown RBP9.16□□□□□ -0.94
RAB5C-204ENST00000547517 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 GABARAPH6UMI1 98 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 HPRT1P00492 218 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 IFNA6P05013 189 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 OR8U8P0C7N1 319 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 RPA2P15927 270 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 TBPP20226 339 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 S100GP29377 79 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 TAS2R31P59538 309 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 OR4A47Q6IF82 309 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 SLC38A6Q8IZM9 456 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 OR4D10Q8NGI6 311 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 MCFD2Q8NI22 146 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 TMEM167AQ8TBQ9 72 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 CD300LFQ8TDQ1 290 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 DPF1Q92782 380 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 FYTTD1Q96QD9 318 aaKnown RBP9.16□□□□□ -0.94
RAB5C-204ENST00000547517 SPIN2AQ99865 258 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 SPIN2BQ9BPZ2 258 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
RAB5C-204ENST00000547517 GPR61Q9BZJ8 451 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 PLEKHA2Q9HB19 425 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 COMMD9Q9P000 198 aa9.16□□□□□ -0.94
RAB5C-204ENST00000547517 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 A0A087WW49 117 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 HMX3A6NHT5 357 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 OR9G9P0C7N8 305 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 MYOD1P15172 320 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 PGAM2P15259 253 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 NQO2P16083 231 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 HLA-GP17693 338 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 RPL27AP46776 148 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 PPP5CP53041 499 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 SLURP1P55000 103 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 TAS2R19P59542 299 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 ERVK-16P61578 105 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 MRPS10P82664 201 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 LPCAT3Q6P1A2 487 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 TMEM229BQ8NBD8 167 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 ADAD2Q8NCV1 583 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 OR4A5Q8NH83 315 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 SMIM4Q8WVI0 70 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 AIFM2Q9BRQ8 373 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 RSRP1Q9BUV0 290 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 RBM38Q9H0Z9 239 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 TMEM140Q9NV12 185 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 AURKAIP1Q9NWT8 199 aaPredicted RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 BET1LQ9NYM9 111 aa9.15□□□□□ -0.94
RAB5C-204ENST00000547517 RSL24D1Q9UHA3 163 aaKnown RBP9.15□□□□□ -0.94
RAB5C-204ENST00000547517 TRAV3A0A0B4J244 114 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 MARCH11A6NNE9 402 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 SEC14L6B5MCN3 397 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 TEX22C9J3V5 150 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 LINC01619G3V211 115 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 ZNF701M0R085 212 aaPredicted RBP9.14□□□□□ -0.95
RAB5C-204ENST00000547517 RAB3DO95716 219 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 PRH1P02810 166 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 CD74P04233 296 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 F2RP25116 425 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 MAS1LP35410 378 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 LPAR6P43657 344 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 POU2AF1Q16633 256 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 SCGB2B2Q4G0G5 96 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 FAAP20Q6NZ36 180 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 STEAP1BQ6NZ63 245 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 REC114Q7Z4M0 266 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 TBC1D26Q86UD7 250 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 ARRDC1Q8N5I2 433 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 NXF2Q9GZY0 626 aaKnown RBP9.14□□□□□ -0.95
RAB5C-204ENST00000547517 SLC2A9Q9NRM0 540 aa9.14□□□□□ -0.95
RAB5C-204ENST00000547517 A0A0G2JLM5 398 aa9.13□□□□□ -0.95
RAB5C-204ENST00000547517 A0A1B0GW64 132 aa9.13□□□□□ -0.95
RAB5C-204ENST00000547517 E7EUB6 86 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms