RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TMEM252Q8N6L7 170 aa15.69■□□□□ 0.1
SKP2-208ENST00000546211 DTD1Q8TEA8 209 aa15.69■□□□□ 0.1
SKP2-208ENST00000546211 C1orf159Q96HA4 380 aa15.69■□□□□ 0.1
SKP2-208ENST00000546211 CIB3Q96Q77 187 aaPredicted RBP15.69■□□□□ 0.1
SKP2-208ENST00000546211 FOXA2Q9Y261 457 aaPredicted RBP15.69■□□□□ 0.1
SKP2-208ENST00000546211 IGSF23A1L1A6 192 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 TIMM23O14925 209 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 IFNA7P01567 189 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 LOXL1Q08397 574 aaPredicted RBP15.68■□□□□ 0.1
SKP2-208ENST00000546211 VMA21Q3ZAQ7 101 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 PRSS57Q6UWY2 283 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 OR4A5Q8NH83 315 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 CLCC1Q96S66 551 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 CRYBG3Q68DQ2 2970 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 SPG11Q96JI7 2443 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 DOPEY2Q9Y3R5 2298 aa15.68■□□□□ 0.1
SKP2-208ENST00000546211 A0A096LNT2 108 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 TRAV20A0A0B4J274 112 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 H3BP45 60 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 KBTBD11O94819 623 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 SPDEFO95238 335 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 LY86O95711 162 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 CD1BP29016 333 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 BAXQ07812 192 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 SSX2Q16385 188 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 STX12Q86Y82 276 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 ZNF680Q8NEM1 530 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 TMEM14BQ9NUH8 114 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 FKBP11Q9NYL4 201 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 FBXL17Q9UF56 701 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 AUP1Q9Y679 476 aa15.67■□□□□ 0.1
SKP2-208ENST00000546211 IGLV2-23P01705 113 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 GATA3P23771 443 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 NHLH2Q02577 135 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 PDLIM3Q53GG5 364 aaPredicted RBP15.66■□□□□ 0.1
SKP2-208ENST00000546211 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 LINC01356Q8N9X3 169 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 ST8SIA2Q92186 375 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 ZDHHC16Q969W1 377 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 TSNAXQ99598 290 aaKnown RBP15.66■□□□□ 0.1
SKP2-208ENST00000546211 RNF5Q99942 180 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 PAIP2BQ9ULR5 123 aaKnown RBP15.66■□□□□ 0.1
SKP2-208ENST00000546211 OR51B2Q9Y5P1 312 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 RNF223E7ERA6 249 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 HSPE1P61604 102 aaKnown RBP15.66■□□□□ 0.1
SKP2-208ENST00000546211 SPINK9Q5DT21 86 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 SPANXN5Q5MJ07 72 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 TMEM167AQ8TBQ9 72 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 CFHR4Q92496 578 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 MALSU1Q96EH3 234 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 REG4Q9BYZ8 158 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 SMIM3Q9BZL3 60 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 CYTL1Q9NRR1 136 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 HIF1ANQ9NWT6 349 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 TCF19Q9Y242 345 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 ZNF257Q9Y2Q1 563 aa15.66■□□□□ 0.1
SKP2-208ENST00000546211 CENPVL3A0A0U1RRI6 287 aa15.65■□□□□ 0.1
SKP2-208ENST00000546211 NPFFO15130 113 aa15.65■□□□□ 0.1
SKP2-208ENST00000546211 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
SKP2-208ENST00000546211 FGF2P09038 288 aa15.65■□□□□ 0.1
SKP2-208ENST00000546211 EIF5AP63241 154 aaKnown RBP15.65■□□□□ 0.1
SKP2-208ENST00000546211 EXOSC2Q13868 293 aaKnown RBP15.65■□□□□ 0.1
SKP2-208ENST00000546211 HABP2Q14520 560 aaPredicted RBP15.65■□□□□ 0.1
SKP2-208ENST00000546211 HIPK2Q9H2X6 1198 aa15.65■□□□□ 0.1
SKP2-208ENST00000546211 C7orf69Q9H7B7 122 aa15.65■□□□□ 0.1
SKP2-208ENST00000546211 SLC25A17O43808 307 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 CST7O76096 145 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 VENTXO95231 258 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 TPT1P13693 172 aaKnown RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 SAA4P35542 130 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 HOXA1P49639 335 aaPredicted RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 SULT1A1P50225 295 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 RPL8P62917 257 aaKnown RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 TMEM267Q0VDI3 215 aaPredicted RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 TEX45Q8NA69 505 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 STOML3Q8TAV4 291 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 BSCL2Q96G97 398 aaPredicted RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 RITA1Q96K30 269 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 Q96MF0 132 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 ENY2Q9NPA8 101 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 UBQLN2Q9UHD9 624 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 STRAPQ9Y3F4 350 aaKnown RBP15.64■□□□□ 0.09
SKP2-208ENST00000546211 TACC2O95359 2948 aa15.64■□□□□ 0.09
SKP2-208ENST00000546211 BORCS7-ASMTA0A0B4J1R7 106 aa15.63■□□□□ 0.09
SKP2-208ENST00000546211 JTBO76095 146 aa15.63■□□□□ 0.09
SKP2-208ENST00000546211 RPP30P78346 268 aaKnown RBP15.63■□□□□ 0.09
SKP2-208ENST00000546211 OR5B3Q8NH48 314 aa15.63■□□□□ 0.09
SKP2-208ENST00000546211 COMMD5Q9GZQ3 224 aa15.63■□□□□ 0.09
SKP2-208ENST00000546211 HEYLQ9NQ87 328 aaPredicted RBP15.63■□□□□ 0.09
SKP2-208ENST00000546211 ITGB1BP2Q9UKP3 347 aa15.63■□□□□ 0.09
SKP2-208ENST00000546211 IGHV1-69DA0A0B4J2H0 117 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 IGKV1D-33P01593 117 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 IGKV1-33P01594 117 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 IGHV1-69P01742 117 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 PSG5Q15238 335 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 RPL7L1Q6DKI1 246 aaKnown RBP15.62■□□□□ 0.09
SKP2-208ENST00000546211 BAP18Q8IXM2 172 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 DYNAPQ8N1N2 210 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 TMEM217Q8N7C4 229 aa15.62■□□□□ 0.09
SKP2-208ENST00000546211 C17orf50Q8WW18 174 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms