RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 HPRT1P00492 218 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 MYOD1P15172 320 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 PI3P19957 117 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 SLC6A1P30531 599 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 ERVK-16P61578 105 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 SSBP2P81877 361 aaPredicted RBP8.59□□□□□ -1.03
DDB1-222ENST00000543627 KIAA0141Q14154 515 aaPredicted RBP8.59□□□□□ -1.03
DDB1-222ENST00000543627 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 FOXB2Q5VYV0 432 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 FAAP20Q6NZ36 180 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
DDB1-222ENST00000543627 AIFM2Q9BRQ8 373 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 MTFP1Q9UDX5 166 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 ZNF580Q9UK33 172 aa8.59□□□□□ -1.03
DDB1-222ENST00000543627 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 GABARAPH6UMI1 98 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 WIPF1O43516 503 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 KRASP01116 189 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 NQO2P16083 231 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 TNFSF8P32971 234 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 G6PCP35575 357 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 RPL27AP46776 148 aaKnown RBP8.58□□□□□ -1.04
DDB1-222ENST00000543627 CRIP2P52943 208 aaPredicted RBP8.58□□□□□ -1.04
DDB1-222ENST00000543627 SLURP1P55000 103 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 TAS2R19P59542 299 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 ZNF616Q08AN1 781 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 MSMO1Q15800 293 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 BEAN1Q3B7T3 259 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 PYDC2Q56P42 97 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 ASPHD1Q5U4P2 390 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 STEAP1BQ6NZ63 245 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 SLC38A6Q8IZM9 456 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 TMEM229BQ8NBD8 167 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 OR4D10Q8NGI6 311 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 CD300LFQ8TDQ1 290 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 DGCR14Q96DF8 476 aaKnown RBP8.58□□□□□ -1.04
DDB1-222ENST00000543627 P2RX4Q99571 388 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 SPIN2AQ99865 258 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 SPIN2BQ9BPZ2 258 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 HINT2Q9BX68 163 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 SLIRPQ9GZT3 109 aaKnown RBP8.58□□□□□ -1.04
DDB1-222ENST00000543627 SLA2Q9H6Q3 261 aa8.58□□□□□ -1.04
DDB1-222ENST00000543627 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 A0A087WW49 117 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 SEC14L6B5MCN3 397 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 DISC1C4P0D8 188 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 LINC01619G3V211 115 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 I3L521 148 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 REG1AP05451 166 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 F2RP25116 425 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 S100A5P33763 92 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 TAS2R31P59538 309 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
DDB1-222ENST00000543627 VAX1Q5SQQ9 334 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 PUSL1Q8N0Z8 303 aaKnown RBP8.57□□□□□ -1.04
DDB1-222ENST00000543627 TMEM167AQ8TBQ9 72 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 MCRIP2Q9BUT9 160 aaKnown RBP8.57□□□□□ -1.04
DDB1-222ENST00000543627 RSRP1Q9BUV0 290 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 TMEM140Q9NV12 185 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 NSG2Q9Y328 171 aa8.57□□□□□ -1.04
DDB1-222ENST00000543627 NOTCH3Q9UM47 2321 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 A0A0G2JLM5 398 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 E7EUB6 86 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 UPK2O00526 184 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 SNAPC5O75971 98 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 OR2J3O76001 311 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 DUS4LO95620 317 aaKnown RBP8.56□□□□□ -1.04
DDB1-222ENST00000543627 HSPB1P04792 205 aaKnown RBP8.56□□□□□ -1.04
DDB1-222ENST00000543627 LGALS1P09382 135 aaKnown RBP8.56□□□□□ -1.04
DDB1-222ENST00000543627 OR8U8P0C7N1 319 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 DEFA4P12838 97 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 HLA-GP17693 338 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 PIGPP57054 158 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 MRPS10P82664 201 aaKnown RBP8.56□□□□□ -1.04
DDB1-222ENST00000543627 PDLIM3Q53GG5 364 aaPredicted RBP8.56□□□□□ -1.04
DDB1-222ENST00000543627 DEFB121Q5J5C9 76 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 C19orf35Q6ZS72 473 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 MARCH1Q8TCQ1 289 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 MRAPQ8TCY5 172 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 DCUN1D4Q92564 292 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 PLEKHA2Q9HB19 425 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 COPZ2Q9P299 210 aa8.56□□□□□ -1.04
DDB1-222ENST00000543627 MARCH11A6NNE9 402 aa8.55□□□□□ -1.04
DDB1-222ENST00000543627 OVOL1O14753 267 aa8.55□□□□□ -1.04
DDB1-222ENST00000543627 RBFOX2O43251 390 aaKnown RBP eCLIP8.55□□□□□ -1.047e-7■■□□□ 13.4
DDB1-222ENST00000543627 RBMXL2O75526 392 aaKnown RBP8.55□□□□□ -1.04
DDB1-222ENST00000543627 TPPPO94811 219 aa8.55□□□□□ -1.04
DDB1-222ENST00000543627 IGHV3-23P01764 117 aa8.55□□□□□ -1.04
DDB1-222ENST00000543627 SERPINE2P07093 398 aa8.55□□□□□ -1.04
DDB1-222ENST00000543627 IL6RP08887 468 aaPredicted RBP8.55□□□□□ -1.04
DDB1-222ENST00000543627 AKAIN1P0CW23 69 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms