RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 B3GALNT1O75752 331 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 CNIH1O95406 144 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 SERPINE2P07093 398 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 IL6RP08887 468 aaPredicted RBP13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 CD28P10747 220 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 RPA2P15927 270 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 VDAC1P21796 283 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 ERVK-16P61578 105 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 GNB1P62873 340 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 CFHR3Q02985 330 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 CADM3Q8N126 398 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 C11orf44Q8N8P7 122 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 DMBX1Q8NFW5 382 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 SGMS2Q8NHU3 365 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 NAA60Q9H7X0 242 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 NUBP2Q9Y5Y2 271 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 WSB1Q9Y6I7 421 aa13.44□□□□□ -0.26
RABGGTA-203ENST00000543002 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 MARCH11A6NNE9 402 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 G3V318 75 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 KRASP01116 189 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 IGKV1-39P01597 117 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 IGKV1D-39P04432 117 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 CCR6P51684 374 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 TMEM267Q0VDI3 215 aaPredicted RBP13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 RBMS2Q15434 407 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 TNXAQ16473 311 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 C19orf54Q5BKX5 351 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 COMMD1Q8N668 190 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 ADAD2Q8NCV1 583 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 OR4X2Q8NGF9 303 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 TMEM230Q96A57 120 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 TMEM140Q9NV12 185 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 TNCP24821 2201 aa13.43□□□□□ -0.26
RABGGTA-203ENST00000543002 UPK2O00526 184 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 ACTL6BO94805 426 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 UCP1P25874 307 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 BTCP35070 178 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 MAS1LP35410 378 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 G6PCP35575 357 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 CD83Q01151 205 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 ECSCRQ19T08 205 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 SP6Q3SY56 376 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 TCTEX1D4Q5JR98 221 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 SGPP2Q8IWX5 399 aa13.42□□□□□ -0.26
RABGGTA-203ENST00000543002 LYRM1O43325 122 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 UPK1BO75841 260 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 NDUFB6O95139 128 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 IGHG4P01861 327 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 OR5AC1P0C628 307 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 RPL8P62917 257 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 TEX38Q6PEX7 206 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 UNQ5815/PRO19632Q6UWF5 114 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 MINDY2Q8NBR6 621 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 LFNGQ8NES3 379 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 SRSF12Q8WXF0 261 aaKnown RBP13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 SEC22AQ96IW7 307 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 CITED2Q99967 270 aaPredicted RBP13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 TMEM222Q9H0R3 208 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 KCNIP3Q9Y2W7 256 aa13.41□□□□□ -0.26
RABGGTA-203ENST00000543002 TRAV3A0A0B4J244 114 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 ELANEP08246 267 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 FGF2P09038 288 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 AKR1C4P17516 323 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 HLA-GP17693 338 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 DHODHQ02127 395 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 FOXE3Q13461 319 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 TRIM16LQ309B1 348 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 C10orf55Q5SWW7 151 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 HIST2H2BDQ6DRA6 164 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 TMED4Q7Z7H5 227 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 GALNT14Q96FL9 552 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 TMEM68Q96MH6 324 aa13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 FOXA2Q9Y261 457 aaPredicted RBP13.4□□□□□ -0.26
RABGGTA-203ENST00000543002 TCRBV4S1A1TA0A5B7 111 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 MSGN1A6NI15 193 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 ATG12O94817 140 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 CDS2O95674 445 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 IGLV1-40P01703 118 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 OPN1MWP04001 364 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 OPN1MW2P0DN77 364 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 OPN1MW3P0DN78 364 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 RPL27AP46776 148 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 SUPT4H1P63272 117 aaKnown RBP13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 TMEM128Q5BJH2 165 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 NDUFA11Q86Y39 141 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 RNF152Q8N8N0 203 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 A0A1W2PN81 502 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 SOX15O60248 233 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 SNAPC5O75971 98 aa13.39□□□□□ -0.27
RABGGTA-203ENST00000543002 IGKV1-5P01602 117 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms