RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 BAZ2BQ9UIF8 2168 aaKnown RBP0.7□□□□□ -2.3
CCDC7-208ENST00000537047 CHD5Q8TDI0 1954 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 REREQ9P2R6 1566 aa0.7□□□□□ -2.3
CCDC7-208ENST00000537047 TRAV38-1A0A0B4J264 116 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 A0A0D9SEW6 157 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 TRAPPC13A5PLN9 417 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 H3BT86 120 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 COX7A2LO14548 114 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 BIRC5O15392 142 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 PLA2G10O15496 165 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 KRT75O95678 551 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 RPL28P46779 137 aaKnown RBP0.69□□□□□ -2.3
CCDC7-208ENST00000537047 CDC34P49427 236 aaPredicted RBP0.69□□□□□ -2.3
CCDC7-208ENST00000537047 RAB14P61106 215 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 ELOBQ15370 118 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 Q1T7F1 81 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 LRRC75BQ2VPJ9 315 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 DEFB115Q30KQ5 88 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 ACSM3Q53FZ2 586 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 FAM78BQ5VT40 261 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 SBSNQ6UWP8 590 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 PLEKHG7Q6ZR37 379 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 C7orf65Q6ZTY9 151 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 DCXRQ7Z4W1 244 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 FUNDC1Q8IVP5 155 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 DYNAPQ8N1N2 210 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 Q8N402 240 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 UBL4BQ8N7F7 174 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 C7orf50Q9BRJ6 194 aaKnown RBP0.69□□□□□ -2.3
CCDC7-208ENST00000537047 HRASLSQ9HDD0 168 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 GMEB1Q9Y692 573 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 TECTAO75443 2155 aa0.69□□□□□ -2.3
CCDC7-208ENST00000537047 MYOFQ9NZM1 2061 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 TMEM269A0A1B0GVZ9 245 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 M0QX08 132 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 SSNA1O43805 119 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 IL3P08700 152 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 HAAOP46952 286 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 AQP4P55087 323 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 POLR2GP62487 172 aaKnown RBP eCLIP0.68□□□□□ -2.3
CCDC7-208ENST00000537047 RPL30P62888 115 aaKnown RBP0.68□□□□□ -2.3
CCDC7-208ENST00000537047 SURF2Q15527 256 aaPredicted RBP0.68□□□□□ -2.3
CCDC7-208ENST00000537047 MOGQ16653 247 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 ARFGEF3Q5TH69 2177 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 C5orf46Q6UWT4 87 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 SLC22A24Q8N4F4 322 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 TMEM251Q8N6I4 163 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 OR2T27Q8NH04 317 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 CMTM5Q96DZ9 223 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 WDR90Q96KV7 1748 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 KCTD7Q96MP8 289 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 BBS2Q9BXC9 721 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 GPR84Q9NQS5 396 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 FKBP14Q9NWM8 211 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 RSL24D1Q9UHA3 163 aaKnown RBP0.68□□□□□ -2.3
CCDC7-208ENST00000537047 AK3Q9UIJ7 227 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 PRELID1Q9Y255 219 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 POLR1DQ9Y2S0 133 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 POLEQ07864 2286 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 MYH11P35749 1972 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 SIPA1L1O43166 1804 aa0.68□□□□□ -2.3
CCDC7-208ENST00000537047 PTPRBP23467 1997 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 IGHV1-69-2A0A0G2JMI3 117 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 MEIS3P1A6NDR6 274 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 OR51F1A6NGY5 319 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 DISC1C4P0D8 188 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ORC5O43913 435 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 MSMBP08118 114 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 TFPTP0C1Z6 253 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 CCL5P13501 91 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 MSNP26038 577 aaKnown RBP0.67□□□□□ -2.3
CCDC7-208ENST00000537047 MED21Q13503 144 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 BATFQ16520 125 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ARHGAP11BQ3KRB8 267 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 SAPCD1Q5SSQ6 148 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 CST9Q5W186 159 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 HIST2H3AQ71DI3 136 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 SLC51BQ86UW2 128 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 TBC1D19Q8N5T2 526 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 EEF1AKMT1Q8WVE0 214 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 DNAJB3Q8WWF6 145 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ACOT12Q8WYK0 555 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ZNF514Q96K75 400 aaPredicted RBP0.67□□□□□ -2.3
CCDC7-208ENST00000537047 CFAP53Q96M91 514 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ODF3Q96PU9 254 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 ADAT1Q9BUB4 502 aaKnown RBP0.67□□□□□ -2.3
CCDC7-208ENST00000537047 NAT8Q9UHE5 227 aa0.67□□□□□ -2.3
CCDC7-208ENST00000537047 GOLGA8KD6RF30 607 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 F5H768 121 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 GOLGA8MH3BSY2 632 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 HCRTO43612 131 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 HLA-DRAP01903 254 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 TRGC1P0CF51 173 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 UBE2G2P60604 165 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 SKP1P63208 163 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 NDUFA5Q16718 116 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 SSX8Q7RTT4 187 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 FAM9CQ8IZT9 166 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 UMODL1-AS1Q8N2C9 162 aa0.66□□□□□ -2.3
CCDC7-208ENST00000537047 SGMS2Q8NHU3 365 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms