RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ANGPTL6Q8NI99 470 aa5.42□□□□□ -1.54
UBQLN1-206ENST00000533705 OSR1Q8TAX0 266 aaPredicted RBP5.42□□□□□ -1.54
UBQLN1-206ENST00000533705 NPFFR1Q9GZQ6 430 aa5.42□□□□□ -1.54
UBQLN1-206ENST00000533705 SMDT1Q9H4I9 107 aa5.42□□□□□ -1.54
UBQLN1-206ENST00000533705 NRXN2Q9P2S2 1712 aa5.42□□□□□ -1.54
UBQLN1-206ENST00000533705 C12orf77C9JDV5 145 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 CELA3BP08861 270 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 BTF3P20290 206 aaKnown RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 MEF2CQ06413 473 aaPredicted RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 CD200R1LQ6Q8B3 271 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 PTBP3O95758 552 aaKnown RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 GCSHP23434 173 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 MEF2BQ02080 365 aaPredicted RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 WDR25Q64LD2 544 aaPredicted RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 PPP1R27Q86WC6 154 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 BET1LQ9NYM9 111 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 FBXL7Q9UJT9 491 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 TET1Q8NFU7 2136 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 LYNX1G3V0Z9 82 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 IGHV3-11P01762 117 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 LYNX1P0DP58 116 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 CD99P14209 185 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 LHX2P50458 406 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 UCP3P55916 312 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 PRB3Q04118 309 aaPredicted RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 C11orf91Q3C1V1 193 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 ZCCHC24Q8N2G6 241 aaKnown RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 C11orf44Q8N8P7 122 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 CYB561D1Q8N8Q1 229 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 RAB24Q969Q5 203 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 TBX15Q96SF7 602 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 C19orf24Q9BVV8 132 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 CDC42EP3Q9UKI2 254 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 ZNFX1Q9P2E3 1918 aaKnown RBP5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 SULT1A2P50226 295 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 HERPUD1Q15011 391 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 C2orf83Q53S99 150 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 ASPHD2Q6ICH7 369 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 FAM159AQ6UWV7 190 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 COLCA1Q6ZS62 124 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 C1QTNF5Q9BXJ0 243 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 WDR90Q96KV7 1748 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 KBTBD11-OT1A0A1B0GTJ5 212 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 H0YL77 283 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 MOSP00540 346 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 EMP1P54849 157 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 TMEM177Q53S58 311 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 ZIC4Q8N9L1 334 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 LHFPL5Q8TAF8 219 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 COL6A6A6NMZ7 2263 aa5.41□□□□□ -1.54
UBQLN1-206ENST00000533705 ARFGEF1Q9Y6D6 1849 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 IGKV1D-43A0A0B4J1Z2 117 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 NTN3O00634 580 aaPredicted RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 THBDP07204 575 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 DLX6P56179 175 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ZNF56Q15929 161 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 CBLN2Q8IUK8 224 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 SMIM8Q96KF7 97 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 NABP2Q9BQ15 211 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 PRO1933Q9H354 126 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 C5orf66Q9H5L9 145 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ELF5Q9UKW6 265 aaPredicted RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 C9JCJ5 164 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 VDAC2P45880 294 aaPredicted RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 CD300CQ08708 224 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 FAM90A1Q86YD7 464 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 GATAD1Q8WUU5 269 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 REPIN1Q9BWE0 567 aaKnown RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 MRPL32Q9BYC8 188 aaKnown RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ESPL1Q14674 2120 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 PARP14Q460N5 1801 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 IQCF6A8MYZ5 107 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 C1QL1O75973 258 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 MT-ND6P03923 174 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 TRGC1P0CF51 173 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 NCMAPQ5T1S8 102 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 OR13A1Q8NGR1 328 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 C8orf46Q8TAG6 207 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 SRSF12Q8WXF0 261 aaKnown RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ZNF837Q96EG3 531 aaPredicted RBP5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 SGK494Q96LW2 274 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 PRSS22Q9GZN4 317 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 SEMA5BQ9P283 1151 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 ZFP30Q9Y2G7 519 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 LINC00312Q9Y6C7 94 aa5.4□□□□□ -1.54
UBQLN1-206ENST00000533705 CCDC88CQ9P219 2028 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 OR4C46A6NHA9 309 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 CIDEAO60543 219 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 GCGP01275 180 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 AMY1AP04745 511 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 GPR183P32249 361 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 RPS11P62280 158 aaKnown RBP eCLIP5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 ABLIM2Q6H8Q1 611 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 ARPC1AQ92747 370 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 GPR82Q96P67 336 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 NPDC1Q9NQX5 325 aaPredicted RBP5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 DEPPQ9NTK1 212 aa5.4□□□□□ -1.55
UBQLN1-206ENST00000533705 SDK2Q58EX2 2172 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms