RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 LGI3Q8N145 548 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 Q8N9W7 124 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 DMBX1Q8NFW5 382 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 GLYATL2Q8WU03 294 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 RBPMSQ93062 196 aaKnown RBP13.65□□□□□ -0.22
CTSB-229ENST00000533572 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 TMEM56Q96MV1 263 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 MARVELD1Q9BSK0 173 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 METTL1Q9UBP6 276 aaKnown RBP13.65□□□□□ -0.22
CTSB-229ENST00000533572 TMEM56-RWDD3S4R434 201 aa13.65□□□□□ -0.22
CTSB-229ENST00000533572 WNK1Q9H4A3 2382 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 SLC25A17O43808 307 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 OR2A4O95047 310 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 S1PR2O95136 353 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 IGLV2-23P01705 113 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 HLA-AP01891 365 aaKnown RBP13.64□□□□□ -0.23
CTSB-229ENST00000533572 RAB25P57735 213 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 SUPT4H1P63272 117 aaKnown RBP13.64□□□□□ -0.23
CTSB-229ENST00000533572 PPP1R1AQ13522 171 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 TMEM187Q14656 261 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 SP6Q3SY56 376 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 C9orf152Q5JTZ5 239 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 LIN54Q6MZP7 749 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 FAM219AQ8IW50 185 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 C11orf44Q8N8P7 122 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 MINDY2Q8NBR6 621 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 COQ8AQ8NI60 647 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 RITA1Q96K30 269 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 OR2A7Q96R45 310 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 GPN1Q9HCN4 374 aaPredicted RBP13.64□□□□□ -0.23
CTSB-229ENST00000533572 SERTAD4Q9NUC0 356 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 BET1LQ9NYM9 111 aa13.64□□□□□ -0.23
CTSB-229ENST00000533572 TRRAPQ9Y4A5 3859 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 TET2Q6N021 2002 aaPredicted RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 C9orf170A2RU37 121 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 SRRM4A7MD48 611 aaKnown RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 INMT-MINDY4F8WBC2 141 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 KCNAB3O43448 404 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 FBXO24O75426 580 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 HLA-DRB1P01911 266 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 IL5P05113 134 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 SAA1P0DJI8 122 aaPredicted RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 ANXA7P20073 488 aaKnown RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 MMD2Q8IY49 270 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 PUSL1Q8N0Z8 303 aaKnown RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 LRTM2Q8N967 370 aa13.63□□□□□ -0.23
CTSB-229ENST00000533572 RRNAD1Q96FB5 475 aaKnown RBP13.63□□□□□ -0.23
CTSB-229ENST00000533572 KBTBD11O94819 623 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 KRASP01116 189 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 CRYGBP07316 175 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 CNTFRP26992 372 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 MAS1LP35410 378 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 AKR1C2P52895 323 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 DHRS2Q13268 280 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 TMEM95Q3KNT9 176 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 FBLN7Q53RD9 439 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 H2BFWTQ7Z2G1 175 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 TMEM167AQ8TBQ9 72 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 FBXL15Q9H469 300 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 CACFD1Q9UGQ2 172 aa13.62□□□□□ -0.23
CTSB-229ENST00000533572 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 SNAPC5O75971 98 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 ACTL6BO94805 426 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 AMY1AP04745 511 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 TMEM268Q5VZI3 342 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 OR4A47Q6IF82 309 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 ZNF562Q6V9R5 426 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 Q6ZS46 218 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 RNASE11Q8TAA1 199 aaKnown RBP13.61□□□□□ -0.23
CTSB-229ENST00000533572 LSM10Q969L4 123 aaKnown RBP13.61□□□□□ -0.23
CTSB-229ENST00000533572 SEC22AQ96IW7 307 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 PHB2Q99623 299 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 TMEM140Q9NV12 185 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 FKBP11Q9NYL4 201 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
CTSB-229ENST00000533572 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 IL6RP08887 468 aaPredicted RBP13.6□□□□□ -0.23
CTSB-229ENST00000533572 VDAC1P21796 283 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 G6PCP35575 357 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 SSX9Q7RTT3 188 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 CENPVQ7Z7K6 275 aaPredicted RBP13.6□□□□□ -0.23
CTSB-229ENST00000533572 FOXRED2Q8IWF2 684 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 SELENOHQ8IZQ5 122 aaKnown RBP13.6□□□□□ -0.23
CTSB-229ENST00000533572 ZNF431Q8TF32 576 aaPredicted RBP13.6□□□□□ -0.23
CTSB-229ENST00000533572 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 MITD1Q8WV92 249 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 PRNDQ9UKY0 176 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 TMED3Q9Y3Q3 217 aa13.6□□□□□ -0.23
CTSB-229ENST00000533572 PKD1L1Q8TDX9 2849 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
CTSB-229ENST00000533572 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 UPK2O00526 184 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 WIPF1O43516 503 aa13.59□□□□□ -0.23
CTSB-229ENST00000533572 TSPAN15O95858 294 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms