RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 IGHV3-23P01764 117 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 HLA-AP01891 365 aaKnown RBP13.51□□□□□ -0.25
PCF11-206ENST00000533018 SDC2P34741 201 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 RPL27AP46776 148 aaKnown RBP13.51□□□□□ -0.25
PCF11-206ENST00000533018 CD81P60033 236 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 CD300EQ496F6 205 aaPredicted RBP13.51□□□□□ -0.25
PCF11-206ENST00000533018 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 OR2K2Q8NGT1 345 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 SECTM1Q8WVN6 248 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
PCF11-206ENST00000533018 Q9H521 79 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 PLEKHA3Q9HB20 300 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
PCF11-206ENST00000533018 TRAV18A0A075B6X5 111 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 LOC100506127A0A0U1RQW1 187 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 TEX22C9J3V5 150 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 HRASP01112 189 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 FAM209BQ5JX69 171 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 IDNKQ5T6J7 187 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 BEST4Q8NFU0 473 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 LYSTQ99698 3801 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 SLC2A8Q9NY64 477 aa13.5□□□□□ -0.25
PCF11-206ENST00000533018 GGCTO75223 188 aaKnown RBP13.49□□□□□ -0.25
PCF11-206ENST00000533018 TPPPO94811 219 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 OR2C1O95371 312 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 ATP6V1G2O95670 118 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 DHFRP00374 187 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 FCER2P06734 321 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 IL6RP08887 468 aaPredicted RBP13.49□□□□□ -0.25
PCF11-206ENST00000533018 CLEC2LP0C7M8 214 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 PTHLHP12272 177 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 FCGR2CP31995 323 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 MAS1LP35410 378 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 GUCA2BQ16661 112 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 ZNF66Q6ZN08 573 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 PUSL1Q8N0Z8 303 aaKnown RBP13.49□□□□□ -0.25
PCF11-206ENST00000533018 GVQW1Q8N7I0 195 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 NEURL2Q9BR09 285 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 CCL28Q9NRJ3 127 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 SLC2A9Q9NRM0 540 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 CEPT1Q9Y6K0 416 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 S4R3C0 116 aa13.49□□□□□ -0.25
PCF11-206ENST00000533018 NPIPB5A8MRT5 1133 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 E7EUB6 86 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 DEFA4P12838 97 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 FOLR2P14207 255 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 AREGP15514 252 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 ARL3P36405 182 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 KIR2DS2P43631 304 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 MECP2P51608 486 aaKnown RBP13.48□□□□□ -0.25
PCF11-206ENST00000533018 EIF4EBP1Q13541 118 aaPredicted RBP13.48□□□□□ -0.25
PCF11-206ENST00000533018 ADAMTSL5Q6ZMM2 481 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 OR5H6Q8NGV6 325 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 YTHDF1Q9BYJ9 559 aaKnown RBP13.48□□□□□ -0.25
PCF11-206ENST00000533018 HRASLSQ9HDD0 168 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 SELENOKQ9Y6D0 94 aa13.48□□□□□ -0.25
PCF11-206ENST00000533018 ZNF320A2RRD8 509 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 C2orf70A6NJV1 201 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 NDUFB8O95169 186 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 REG1AP05451 166 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 CD7P09564 240 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 ZNF735P0CB33 412 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 EDN2P20800 178 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 PSMB6P28072 239 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 BRWD1-AS2P59051 145 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 FXYD4P59646 89 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 RPL8P62917 257 aaKnown RBP13.47□□□□□ -0.25
PCF11-206ENST00000533018 DEFB114Q30KQ6 69 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 CLEC19AQ6UXS0 136 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 LAX1Q8IWV1 398 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 SPAG16Q8N0X2 631 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 OR13F1Q8NGS4 319 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 EEF1AKMT3Q96AZ1 226 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 RETNQ9HD89 108 aa13.47□□□□□ -0.25
PCF11-206ENST00000533018 ZNF785A8K8V0 405 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 PPYP01298 95 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 MYOD1P15172 320 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 HLA-GP17693 338 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 ZNF773Q6PK81 442 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 HOGA1Q86XE5 327 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 DEFB125Q8N687 156 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 SLC5A7Q9GZV3 580 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
PCF11-206ENST00000533018 ETV7Q9Y603 341 aa13.46□□□□□ -0.25
PCF11-206ENST00000533018 LCE6AA0A183 80 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 A0A1B0GW64 132 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 SULT1C2O00338 296 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 CRYGCP07315 174 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 HIST1H1BP16401 226 aaKnown RBP13.45□□□□□ -0.26
PCF11-206ENST00000533018 SCAND1P57086 179 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 CATR1Q13166 79 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 NEDD8Q15843 81 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 FAM106AQ4KMX7 169 aa13.45□□□□□ -0.26
PCF11-206ENST00000533018 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms