RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 DMRT1Q9Y5R6 373 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
CPSF1-207ENST00000531727 NPIPB5A8MRT5 1133 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 E7EUB6 86 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 ATP6V1G2O95670 118 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 IL6RP08887 468 aaPredicted RBP12.74□□□□□ -0.37
CPSF1-207ENST00000531727 CLEC2LP0C7M8 214 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 SCAND1P57086 179 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 ARPC4P59998 168 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 MXD1Q05195 221 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 C19orf35Q6ZS72 473 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 LAX1Q8IWV1 398 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 SLC2A9Q9NRM0 540 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 ETV7Q9Y603 341 aa12.74□□□□□ -0.37
CPSF1-207ENST00000531727 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 A0A1B0GW64 132 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 DPPA5A6NC42 116 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 PPP5D1E7EU14 171 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 HRASP01112 189 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 ZNF735P0CB33 412 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 KIR2DS2P43631 304 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 MSMO1Q15800 293 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 CD300EQ496F6 205 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-207ENST00000531727 ZFAND6Q6FIF0 208 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 ZNF773Q6PK81 442 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 BEST4Q8NFU0 473 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 OR5H6Q8NGV6 325 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 SECTM1Q8WVN6 248 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 SLC25A38Q96DW6 304 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
CPSF1-207ENST00000531727 GPHA2Q96T91 129 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 FBXL7Q9UJT9 491 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 RYR2Q92736 4967 aa12.73□□□□□ -0.37
CPSF1-207ENST00000531727 A0A0A6YYH2 397 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 A6NJ64 397 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 ZNF785A8K8V0 405 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 GGCTO75223 188 aaKnown RBP12.72□□□□□ -0.37
CPSF1-207ENST00000531727 IFNA6P05013 189 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 CRYGCP07315 174 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 FCGR2CP31995 323 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 CD81P60033 236 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 SSX9Q7RTT3 188 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 HOGA1Q86XE5 327 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 GVQW1Q8N7I0 195 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 FANCD2OSQ96PS1 177 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 RNF167Q9H6Y7 350 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
CPSF1-207ENST00000531727 STARD9Q9P2P6 4700 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 C2orf70A6NJV1 201 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 LGALS9O00182 355 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 TNFSF12O43508 249 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 OR2C1O95371 312 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 HLA-AP01891 365 aaKnown RBP12.71□□□□□ -0.37
CPSF1-207ENST00000531727 PTHLHP12272 177 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 AREGP15514 252 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 PSMB6P28072 239 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 RPL8P62917 257 aaKnown RBP12.71□□□□□ -0.37
CPSF1-207ENST00000531727 KLK9Q2XQG4 91 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 LINC00322Q6ZN03 302 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-207ENST00000531727 ZBTB34Q8NCN2 500 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 OR4A5Q8NH83 315 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 NEURL2Q9BR09 285 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 SLC2A8Q9NY64 477 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 BET1LQ9NYM9 111 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 KLK9Q9UKQ9 250 aa12.71□□□□□ -0.37
CPSF1-207ENST00000531727 LOC100506127A0A0U1RQW1 187 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 LCE6AA0A183 80 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 TPPPO94811 219 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 NDUFB8O95169 186 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 DHFRP00374 187 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 PPYP01298 95 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 FOLR2P14207 255 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 HIST1H1BP16401 226 aaKnown RBP12.7□□□□□ -0.38
CPSF1-207ENST00000531727 CTRB1P17538 263 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 HLA-GP17693 338 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 EDN2P20800 178 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 TIMM50Q3ZCQ8 353 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 CTRB2Q6GPI1 263 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 OR4A47Q6IF82 309 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 SPAG16Q8N0X2 631 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 CCDC140Q96MF4 163 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 TECRQ9NZ01 308 aaKnown RBP12.7□□□□□ -0.38
CPSF1-207ENST00000531727 CEPT1Q9Y6K0 416 aa12.7□□□□□ -0.38
CPSF1-207ENST00000531727 TENM2Q9NT68 2774 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 RBFOX2O43251 390 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPSF1-207ENST00000531727 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 CD7P09564 240 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 MYOD1P15172 320 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 ARL3P36405 182 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 EEF1AKMT3Q96AZ1 226 aa12.69□□□□□ -0.38
CPSF1-207ENST00000531727 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms