RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.424e-6■■■■□ 21.5
USP35-204ENST00000530267 PPIAL4FP0DN26 164 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 GRNP28799 593 aaKnown RBP12.43□□□□□ -0.42
USP35-204ENST00000530267 RAB13P51153 203 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 OR4A47Q6IF82 309 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
USP35-204ENST00000530267 RPUSD1Q9UJJ7 312 aaKnown RBP12.43□□□□□ -0.42
USP35-204ENST00000530267 PPIAL4AQ9Y536 164 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 PLAUP00749 431 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 CD1BP29016 333 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 GNB2P62879 340 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 GCSAMLQ5JQS6 135 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 DMRTC2Q8IXT2 367 aaPredicted RBP12.43□□□□□ -0.42
USP35-204ENST00000530267 GATAD1Q8WUU5 269 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
USP35-204ENST00000530267 NCOR1P1Q9H4R4 102 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 TMEM106BQ9NUM4 274 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 TCF19Q9Y242 345 aa12.43□□□□□ -0.42
USP35-204ENST00000530267 OR2C1O95371 312 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 IFNA4P05014 189 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 REG1BP48304 166 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 TMPRSS3P57727 454 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 DIRC2Q96SL1 478 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 KIR2DS2P43631 304 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
USP35-204ENST00000530267 THBS3P49746 956 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 TMEM200BQ69YZ2 307 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
USP35-204ENST00000530267 TIMM9Q9Y5J7 89 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
USP35-204ENST00000530267 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 AKR1D1P51857 326 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 NHLH1Q02575 133 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
USP35-204ENST00000530267 ITGB1BP1O14713 200 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 MT-ND4LP03901 98 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 VWC2Q2TAL6 325 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 FAM90A2PQ658T7 463 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 ZNF343Q6P1L6 599 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
USP35-204ENST00000530267 CENPVQ7Z7K6 275 aaPredicted RBP12.41□□□□□ -0.42
USP35-204ENST00000530267 CORO2AQ92828 525 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 RAB24Q969Q5 203 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
USP35-204ENST00000530267 FAM90A9PA6NNJ1 464 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 C15orf61A6NNL5 157 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 SRRM4A7MD48 611 aaKnown RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 VSTM5A8MXK1 200 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 LYNX1G3V0Z9 82 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 LYNX1P0DP58 116 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 HABP2Q14520 560 aaPredicted RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 AARDQ4LEZ3 155 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 NCMAPQ5T1S8 102 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 KDF1Q8NAX2 398 aaPredicted RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 OR13D1Q8NGV5 346 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 CA5BP1Q8WTZ4 195 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 TVP23CQ96ET8 276 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 ZNF714Q96N38 554 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 GAL3ST2Q9H3Q3 398 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 GAB2Q9UQC2 676 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 HRNRQ86YZ3 2850 aaPredicted RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 RPL35P42766 123 aaKnown RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 ZNF674Q2M3X9 581 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 MS4A5Q9H3V2 200 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 PATZ1Q9HBE1 687 aaKnown RBP12.4□□□□□ -0.42
USP35-204ENST00000530267 SLC35D1Q9NTN3 355 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 CTSZQ9UBR2 303 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 VAX2Q9UIW0 290 aa12.4□□□□□ -0.42
USP35-204ENST00000530267 COL12A1Q99715 3063 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 C17orf112F2Z3M2 114 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 DVL1O14640 695 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 RAB5AP20339 215 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 COL8A2P25067 703 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 RPP30P78346 268 aaKnown RBP12.39□□□□□ -0.43
USP35-204ENST00000530267 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 LINC00574Q9H8X3 128 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 CTXND1A0A1B0GTU2 59 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 CCL21O00585 134 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 NDUFB3O43676 98 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
USP35-204ENST00000530267 DIAPH2-AS1Q14236 149 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 Q8N7P7 452 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 OR52E5Q8NH55 327 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
USP35-204ENST00000530267 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
USP35-204ENST00000530267 TMEM14BQ9NUH8 114 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 WDR83OSQ9Y284 106 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 OR51B2Q9Y5P1 312 aa12.39□□□□□ -0.43
USP35-204ENST00000530267 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
USP35-204ENST00000530267 HRASP01112 189 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms