RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
UBXN1-205ENST00000525004 ZNF702PQ9H963 129 aa11.11□□□□□ -0.63
UBXN1-205ENST00000525004 SHPKQ9UHJ6 478 aa11.11□□□□□ -0.63
UBXN1-205ENST00000525004 DUXBA0A1W2PPF3 345 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 UPK2O00526 184 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 PRAF2O60831 178 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 ATG12O94817 140 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 KBTBD11O94819 623 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 IGKV1-5P01602 117 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 HLA-AP01891 365 aaKnown RBP11.1□□□□□ -0.63
UBXN1-205ENST00000525004 G6PCP35575 357 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 PRSS8Q16651 343 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 LGI3Q8N145 548 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 MITD1Q8WV92 249 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 TPSG1Q9NRR2 321 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 TMEM140Q9NV12 185 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 ZNF580Q9UK33 172 aa11.1□□□□□ -0.63
UBXN1-205ENST00000525004 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 DBX1A6NMT0 343 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 CRYBA1P05813 215 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 HKR1P10072 659 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 VDAC1P21796 283 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 VAMP1P23763 118 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 MAS1LP35410 378 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 ERVK-16P61578 105 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 SRSF2Q01130 221 aaKnown RBP11.09□□□□□ -0.63
UBXN1-205ENST00000525004 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 TRIM16LQ309B1 348 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 C4orf46Q504U0 113 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 TMEM268Q5VZI3 342 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 ZNF695Q8IW36 515 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 DMBX1Q8NFW5 382 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-205ENST00000525004 CHPT1Q8WUD6 406 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 ZNF430Q9H8G1 570 aaPredicted RBP11.09□□□□□ -0.63
UBXN1-205ENST00000525004 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 MMP24Q9Y5R2 645 aa11.09□□□□□ -0.63
UBXN1-205ENST00000525004 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
UBXN1-205ENST00000525004 TRAV3A0A0B4J244 114 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 SNRPGP15A8MWD9 76 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 CREBL2O60519 120 aaPredicted RBP11.08□□□□□ -0.64
UBXN1-205ENST00000525004 DHFRP00374 187 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 IGF1P05019 195 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
UBXN1-205ENST00000525004 RAB25P57735 213 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 CX3CL1P78423 397 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 AARDQ4LEZ3 155 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 NMSQ5H8A3 153 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 H2BFWTQ7Z2G1 175 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 SLC35G3Q8N808 338 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 MINDY2Q8NBR6 621 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 OR52B4Q8NGK2 314 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 SERTAD4Q9NUC0 356 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 PRR13Q9NZ81 148 aa11.08□□□□□ -0.64
UBXN1-205ENST00000525004 A0A0B4J293 547 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 TMEM89A2RUT3 159 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 SH2D7A6NKC9 451 aaPredicted RBP11.07□□□□□ -0.64
UBXN1-205ENST00000525004 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 KCNAB3O43448 404 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 CA2P00918 260 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
UBXN1-205ENST00000525004 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
UBXN1-205ENST00000525004 PLGLAQ15195 96 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 KRTAP24-1Q3LI83 254 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 Q6ZRM9 215 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 LINC01006Q8NI28 216 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 COQ8AQ8NI60 647 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 RRNAD1Q96FB5 475 aaKnown RBP11.07□□□□□ -0.64
UBXN1-205ENST00000525004 SEC22CQ9BRL7 303 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 COA4Q9NYJ1 87 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 TMED3Q9Y3Q3 217 aa11.07□□□□□ -0.64
UBXN1-205ENST00000525004 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 SLC25A6P12236 298 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
UBXN1-205ENST00000525004 AKR1C2P52895 323 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 RIPPLY3P57055 190 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 NDPQ00604 133 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 FXYD3Q14802 87 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 FOXRED2Q8IWF2 684 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.06□□□□□ -0.64
UBXN1-205ENST00000525004 OR4F5Q8NH21 305 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
UBXN1-205ENST00000525004 TAF15Q92804 592 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBXN1-205ENST00000525004 GPR146Q96CH1 333 aa11.06□□□□□ -0.64
UBXN1-205ENST00000525004 PHB2Q99623 299 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms